Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., histidine / lysine / arginine / ornithine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  256 bits (655), Expect = 2e-73
 Identities = 126/227 (55%), Positives = 176/227 (77%), Gaps = 4/227 (1%)

Query: 2   DFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLR 61
           D++++ ++LP+Y  GL TT+ L+++SL  GLL AIPL + R S+Q   +L AW Y Y +R
Sbjct: 4   DYNVVWEALPMYFGGLLTTLKLLAISLFFGLLAAIPLGLMRVSRQPVVNLAAWLYTYVIR 63

Query: 62  GTPLLVQLYLIYYGMDQWFPVKDTLW----EHAWFCALVAFILNTSAYTAEIIRGAINGL 117
           GTP+LVQL+LIYYG+ Q+  V+++++      A FCA +AF +NTSAYTAEII G++   
Sbjct: 64  GTPMLVQLFLIYYGLAQFEAVRESIFWPLLSSATFCACLAFGINTSAYTAEIIAGSLKAT 123

Query: 118 PKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGA 177
           P GE+EAAKA GMSR + Y+RI+LPSALRR+LP YSNEVI ML  +++A IVT++D+TGA
Sbjct: 124 PHGEIEAAKAMGMSRMKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGA 183

Query: 178 ARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPR 224
           AR VN++YY PFEA+++AG+FY+ LTFI++  FK AE+R+L YL PR
Sbjct: 184 ARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKMAERRWLGYLAPR 230