Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  195 bits (496), Expect = 5e-55
 Identities = 102/219 (46%), Positives = 151/219 (68%), Gaps = 4/219 (1%)

Query: 1   MDFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFL 60
           M++ +I   LP    G   T+ LV++++V GL+ AIPL IAR+S+  +     + YI+F 
Sbjct: 1   MNWEVIFKWLPRLAEGATLTLELVAIAVVAGLILAIPLGIARSSRHWYVRAVPFSYIFFF 60

Query: 61  RGTPLLVQLYLIYYGMDQWFPVKDT-LWEHA---WFCALVAFILNTSAYTAEIIRGAING 116
           RGTPLLVQL+L+YYG+ Q+  V+ + LW +    ++C ++   L+T+AY AEI+RGA+  
Sbjct: 61  RGTPLLVQLFLVYYGLAQFDAVRSSSLWPYLRDPFWCTVLTMTLHTAAYIAEILRGALQA 120

Query: 117 LPKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTG 176
           +PKGE+EAA+A GMSR +T   I+LP A R  LPAYSNEVI ML  SA+A  VT+++LTG
Sbjct: 121 IPKGEIEAARALGMSRGKTLFYIMLPRAARIGLPAYSNEVILMLKASALASTVTLLELTG 180

Query: 177 AARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQ 215
            AR + +R Y P E F +AG+FY+ ++F+++  FK  E+
Sbjct: 181 MARTIIARTYLPVEIFFAAGVFYLVISFMLVQGFKLLER 219