Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., ABC transporter permease from Pseudomonas sp. SVBP6

 Score =  262 bits (669), Expect = 5e-75
 Identities = 131/227 (57%), Positives = 179/227 (78%), Gaps = 4/227 (1%)

Query: 2   DFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLR 61
           D+++I ++LP+YL+GL TT+ L++LSL+ GLL AIPL + R SKQ   ++ AW Y Y +R
Sbjct: 4   DYNVIWEALPLYLNGLLTTLKLLALSLLFGLLAAIPLGLMRVSKQPLVNMSAWLYTYVIR 63

Query: 62  GTPLLVQLYLIYYGMDQWFPVKDT-LW---EHAWFCALVAFILNTSAYTAEIIRGAINGL 117
           GTP+LVQL+LIYYG+ Q+  V+++ LW     A FCA +AF +NTSAYTAEII G++   
Sbjct: 64  GTPMLVQLFLIYYGLAQFAVVRESFLWPWLSSATFCACLAFAINTSAYTAEIIAGSLKAT 123

Query: 118 PKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGA 177
           P GE+EAAKA GMSR + Y+RI+LPSALRR+LP YSNEVI ML  +++A IVT++D+TGA
Sbjct: 124 PHGEIEAAKAMGMSRVKMYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGA 183

Query: 178 ARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPR 224
           AR VN++YY PFEA+++AG+FY+ LTFI++  FK AE+R+L YL PR
Sbjct: 184 ARTVNAQYYLPFEAYITAGVFYLCLTFILVRLFKLAERRWLGYLAPR 230