Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., Histidine transport system permease protein HisM from Pseudomonas sp. RS175

 Score =  184 bits (467), Expect = 1e-51
 Identities = 99/217 (45%), Positives = 140/217 (64%), Gaps = 5/217 (2%)

Query: 12  IYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYL 71
           + ++GL  T+WL+S SL+IG + +IPL+IAR S + +   P   Y Y  RGTPL +QL +
Sbjct: 18  VNVTGLAMTLWLLSASLLIGFVMSIPLSIARVSPRFYVRWPVQFYTYLFRGTPLYIQLLI 77

Query: 72  IYYGMDQWF-----PVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKGEVEAAK 126
            Y G+         P+ D+ +  A  C ++AF LNT AYT EI  GAI  +  GEVEAAK
Sbjct: 78  CYTGIYSIAAVRAQPLLDSFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMNHGEVEAAK 137

Query: 127 AYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYY 186
           AYG++ ++ Y  +I+PSALRRSLP YSNEVI MLH + VA   T+ D+   AR  NS  +
Sbjct: 138 AYGLTGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATVPDVLKVARDANSATF 197

Query: 187 APFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKP 223
             F++F  A L Y+++TF ++  F+ AE+R+LA+L P
Sbjct: 198 LTFQSFGIAALIYLSVTFALVGLFRLAERRWLAFLGP 234