Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., ABC transporter permease subunit from Paraburkholderia sabiae LMG 24235

 Score =  148 bits (373), Expect = 1e-40
 Identities = 82/225 (36%), Positives = 134/225 (59%), Gaps = 4/225 (1%)

Query: 2   DFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLR 61
           DF  + D+L   L  + TT+ L   SLV+G L ++ +   R S     +  A  YI   R
Sbjct: 4   DFDFLFDTLRQLLGAVPTTLGLFFSSLVLGGLLSLVIVTMRVSPHWLPNRFARAYILVFR 63

Query: 62  GTPLLVQLYLIYYGMDQWFPVKDT-LW---EHAWFCALVAFILNTSAYTAEIIRGAINGL 117
           G+PLL+Q++L+YYG+ Q+  ++++ LW      + CA+++  L T+ YTAEIIRG +  +
Sbjct: 64  GSPLLIQMFLVYYGLGQFGVIRESFLWPVLREPYVCAVLSLALCTAGYTAEIIRGGLMAV 123

Query: 118 PKGEVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGA 177
           P G++EA  + G+S F   +RII P ALR+ LPAYS E + ++  +A+A +VT+ ++TG 
Sbjct: 124 PVGQIEAGYSIGLSGFSLLRRIIGPIALRQCLPAYSTEAVLLVKSTALASLVTVWEVTGV 183

Query: 178 ARLVNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFLAYLK 222
           A+ +  + Y   E F+ A L Y+ L F+I+      E+R   +L+
Sbjct: 184 AQQIIQQTYRTTEVFICAALIYLFLNFVIVRLLGLLERRLSQHLR 228