Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., polar amino acid ABC transporter, inner membrane subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  131 bits (329), Expect = 1e-35
 Identities = 66/216 (30%), Positives = 126/216 (58%), Gaps = 10/216 (4%)

Query: 2   DFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLR 61
           +F+ ++ + P +L G W T+ L   + V+G +     AI R  + +W S     Y+  +R
Sbjct: 6   EFASVLAAWPQFLEGAWMTIQLSFPATVLGFVIGTLCAIGRRGQVRWVSRLCGAYVEVIR 65

Query: 62  GTPLLVQLYLIYYGMDQWFPVKDTLWE-HAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120
            TPLLVQ++L+++G+          W+  A+  ALV+ ++N +AY+ EI+R  ++ + KG
Sbjct: 66  NTPLLVQVFLVFFGL------ASLGWKVSAFTAALVSLVINVAAYSCEIMRAGMDSIHKG 119

Query: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180
           ++EAA+  G++R Q Y  +IL  A+ +  PA +++ + ++  +++   +++ +LT  A  
Sbjct: 120 QLEAAECLGLTRRQVYWHVILRPAMEKVYPALTSQFVLLMLATSITSQISVEELTAIAAR 179

Query: 181 VNSRYYAPFEAFLSAGLFYMALTFII---LWCFKQA 213
           V S  + PFEA++   + Y+AL+ ++   LW F QA
Sbjct: 180 VQSETFRPFEAYILVAVAYLALSLLMRVGLWLFGQA 215