Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  184 bits (466), Expect = 2e-51
 Identities = 99/215 (46%), Positives = 139/215 (64%), Gaps = 5/215 (2%)

Query: 15  SGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPLLVQLYLIYY 74
           +G+  T+WL+  S+V+G L A+ LA+ R S  K+   P W + Y  RGTPL VQL + Y 
Sbjct: 21  TGVAITLWLLISSVVMGGLLAVILAVGRVSSNKFIRFPIWLFTYIFRGTPLYVQLLVFYS 80

Query: 75  GMDQWFPVKDTLWEHAWF-----CALVAFILNTSAYTAEIIRGAINGLPKGEVEAAKAYG 129
           GM     VK T   +A+F     C ++A  LNT AYT EI  GAI  +P GE+EAA+AYG
Sbjct: 81  GMYTLEIVKGTDLLNAFFRSGLNCTVLALTLNTCAYTTEIFAGAIRSVPHGEIEAARAYG 140

Query: 130 MSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARLVNSRYYAPF 189
            S F+ Y+ IILPSALR +LPAYSNEVI MLH +A+A   T+ DL   AR +NS  Y PF
Sbjct: 141 FSSFKMYRCIILPSALRIALPAYSNEVILMLHSTALAFTATVPDLLKIARDINSATYQPF 200

Query: 190 EAFLSAGLFYMALTFIILWCFKQAEQRFLAYLKPR 224
            AF  A + Y+ ++++++  F++AE+R+L ++  +
Sbjct: 201 TAFGIAAVLYLLISYVLISLFRRAERRWLQHVSSK 235