Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 222 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  130 bits (328), Expect = 2e-35
 Identities = 75/220 (34%), Positives = 125/220 (56%), Gaps = 7/220 (3%)

Query: 6   IIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFLRGTPL 65
           +++  P  + GL T++ L   S+++ L+ A+   I    K         GYI    GTPL
Sbjct: 1   MLEYFPELMKGLHTSLTLTVASIIVALILALIFTIILTLKTPVLVWIVRGYITLFTGTPL 60

Query: 66  LVQLYLIYYGMDQW-----FPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120
           LVQ++LIYYG  Q+     +PV   L    W CAL+A  LN++AYT ++  GAI  +P+G
Sbjct: 61  LVQIFLIYYGPGQFPSLQEYPVIWHLLSEPWLCALIALSLNSAAYTTQLFYGAIRAIPEG 120

Query: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180
           + ++  A GMS+  T   I+LP A +R+L +YSNEV+ +   +++A  +T+M++ G  +L
Sbjct: 121 QWQSCGALGMSKKDTL-AILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQL 179

Query: 181 VNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFLAY 220
           +  R Y     F +AG+ Y+ +  ++    +  E+R LA+
Sbjct: 180 LYGRTY-DVMVFGAAGVVYLVVNGLLTLMMRLIERRALAF 218