Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 221 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Enterobacter asburiae PDN3

 Score =  135 bits (339), Expect = 8e-37
 Identities = 80/218 (36%), Positives = 122/218 (55%), Gaps = 5/218 (2%)

Query: 1   MDFSLIIDSLPIYLSGLWTTVWLVSLSLVIGLLCAIPLAIARNSKQKWFSLPAWGYIYFL 60
           +DFS +    P  L+GLW TV L  ++ V GL   I  A  R+ +  WFS     Y+  +
Sbjct: 5   LDFSALWPHWPELLAGLWVTVQLTVMATVGGLAIGIFGAAIRSGRTTWFSRIWGAYVEII 64

Query: 61  RGTPLLVQLYLIYYGMDQWFPVKDTLWEHAWFCALVAFILNTSAYTAEIIRGAINGLPKG 120
           R TP +VQL+ I +G+     +K T  E     AL+A ++N  AY+ EIIR  I   PKG
Sbjct: 65  RNTPFVVQLFFIVFGLPN-LGLKMTAGE----AALLAMVVNLGAYSTEIIRAGIQVTPKG 119

Query: 121 EVEAAKAYGMSRFQTYQRIILPSALRRSLPAYSNEVIFMLHGSAVAGIVTIMDLTGAARL 180
           + EA +  G++R QT+ R++LP AL+R  PA  ++ I ++ GS+V   V+  +LT AA L
Sbjct: 120 QWEAGRVLGLTRLQTFIRVVLPPALQRIYPALVSQCIIVMLGSSVVSQVSYEELTFAANL 179

Query: 181 VNSRYYAPFEAFLSAGLFYMALTFIILWCFKQAEQRFL 218
           + SR +  FE +L     Y+AL+  +      A +++L
Sbjct: 180 IQSRTFLSFEVYLVTTGIYLALSITLRQLMMAAGRKWL 217