Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

 Score =  125 bits (313), Expect = 1e-33
 Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 14/275 (5%)

Query: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGY-QVYFHGQ 59
           + V ++NIN +R RL  ++A +++ +PDV+ LQE K  D+ FP   +  MG+  +  +GQ
Sbjct: 3   LTVCTWNINSVRIRLDIVRAALERLRPDVLCLQETKCQDDKFPLNAIRDMGFPHIALNGQ 62

Query: 60  KAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNV-- 117
           K  +GVA   K+    + KG      + +   +    A   G+  TI N Y P G +V  
Sbjct: 63  KGWHGVATFSKRPFAHIEKGEFCGKGDARHIAVTLDGAHALGKPLTIHNFYVPAGGDVPD 122

Query: 118 -EHETKFPYKRQFYRDLMTY--LREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQ 174
            E   KF +K  F  ++ ++  L+    N +  +V+GD+NI+PL+ D+     + K+ L 
Sbjct: 123 PELNPKFAHKLAFLDEITSWPPLKPDAGNGDHAIVVGDLNIAPLETDVW----SHKQLLT 178

Query: 175 TGKCSFQPEEREWLQTLLDWG-LVDTFRQLHPDVSDQFSWFDYRSRGFEDN-RGLRIDVI 232
               S  P E E L  L   G  VD  R+  P     F+W+ YRS  +  N RG R+D +
Sbjct: 179 V--VSHTPVEVERLGALQASGPWVDVMRRFVPPQEKLFTWWSYRSPDYTANDRGRRLDHV 236

Query: 233 LATPTLAETCQEAGIDYELRAIDKPSDHAPIWTTF 267
            A+ +LA +     +  E R  +KPSDH P+  TF
Sbjct: 237 WASESLAPSATAMTVLKEARGWEKPSDHVPVAMTF 271