Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 267 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 1e-30
 Identities = 85/273 (31%), Positives = 136/273 (49%), Gaps = 27/273 (9%)

Query: 2   KVISFNINGLR-ARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFH--G 58
           K+ S N+NGLR A    +   + +  PD I +QEI+V       +  E  G + +FH   
Sbjct: 3   KLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDVEGRFEEMAGLKGHFHFAE 62

Query: 59  QKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVE 118
           +K + G A+  K  P +V+ G+     + + R +   F D   +K ++++ YFP G + E
Sbjct: 63  KKGYAGTAVYTKHAPSQVVVGWGDAEFDAEGRYLELRF-DTPKRKFSVISCYFPSGSSGE 121

Query: 119 H--ETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTG 176
              E KF + + F+  L+   +E        V+ GDINI+   +D+     N+K      
Sbjct: 122 ERQEAKFRFLKGFFPHLVALKKERE-----FVLCGDINIAHQQIDLKNWRGNQKN----- 171

Query: 177 KCSFQPEEREWLQTLLDWG-----LVDTFRQLHPDVSDQ-FSWFDYRSRGFEDNRGLRID 230
              F PEER W+  LLD G     LVD +R+L PD +D+ ++W+  R + + +N G R+D
Sbjct: 172 -SGFLPEERAWMTRLLDAGTEGAGLVDVYRKLKPDTTDEAYTWWSNRGQAYANNVGWRLD 230

Query: 231 VILATPTLAETCQEAGIDYELRAIDKPSDHAPI 263
             LATP +    +      ++    K SDHAPI
Sbjct: 231 YHLATPAIGALARTE----QIYKTVKFSDHAPI 259