Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Exodeoxyribonuclease III (EC 3.1.11.2) from Sphingobium sp. HT1-2

 Score =  149 bits (377), Expect = 4e-41
 Identities = 94/269 (34%), Positives = 142/269 (52%), Gaps = 14/269 (5%)

Query: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60
           M++ +FNING++ARL +L   +D+ +PD+  LQEIK  DE FP +++E  GY V +HGQK
Sbjct: 1   MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDAGYGVIWHGQK 60

Query: 61  AHYGVAILCK-QTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEH 119
              GVAIL +   PVEV +G   + E+ Q R +    AD  G +   +  Y P G N + 
Sbjct: 61  GFNGVAILARGDQPVEVRRGLEGEPEDEQSRYLE---ADVKGVRVASI--YLPNG-NPQP 114

Query: 120 ETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCS 179
             KF YK ++ + L     E  +     ++ GD N+ P D+DI   +A            
Sbjct: 115 GPKFDYKLRWMKRLRERAAEIWAEEVPAILAGDYNVIPRDVDIYSPKA------MADDAL 168

Query: 180 FQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLA 239
            QPE RE  + LL  G  D+    HP     ++++DY++  +  + G RID +L +P  A
Sbjct: 169 MQPESREAYRRLLGDGWTDSILTRHP-AGGVWTYWDYQAGAWPRDAGFRIDHLLLSPAAA 227

Query: 240 ETCQEAGIDYELRAIDKPSDHAPIWTTFK 268
           +   +A +D   R  +K SDHAP W   +
Sbjct: 228 DRLVDAQVDKAFRGREKASDHAPTWVELR 256