Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 9e-45
 Identities = 102/265 (38%), Positives = 145/265 (54%), Gaps = 14/265 (5%)

Query: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60
           +K+ +FNING+R+RL  L A +++ QPD+  LQE+K  D+ FPR E+EA GY    HGQ 
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHHGQP 63

Query: 61  AHYGVAILCK-QTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEH 119
           +  GVAIL +   P+EV +G P   E+ Q R + A     +G     L  Y P G N   
Sbjct: 64  SWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA---AHGVLVACL--YLPNG-NPLP 117

Query: 120 ETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCS 179
             KF YK  ++  L+ + R  + +    ++ GD N+ P D+DI     N + WL+     
Sbjct: 118 GPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDI----YNPRSWLK--DAL 171

Query: 180 FQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLA 239
            QPE R   Q LLD G +D  R L+PD    ++++DY    +  N GLRID +L    LA
Sbjct: 172 LQPESRACYQRLLDQGWLDAIRHLYPD-ERVYTFWDYFRNHWARNAGLRIDHLLLNRELA 230

Query: 240 ETCQEAGIDYELRAIDKPSDHAPIW 264
              + AG+D  +R   K SDHAP+W
Sbjct: 231 PYLKRAGVDAWVRNQAKASDHAPVW 255