Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  217 bits (553), Expect = 1e-60
 Identities = 156/515 (30%), Positives = 263/515 (51%), Gaps = 30/515 (5%)

Query: 196 ITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKV 255
           +T P  ++  TG+ L  S++ P      +IG  G DL+L  L+      +   F G G  
Sbjct: 140 LTEP-YIDAATGK-LIISVATPSTQGTQSIGVVGGDLSLQTLVDNIGALN---FGGMGYA 194

Query: 256 SIVS-ENNALVASDAAFL--TLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFA 312
            +VS +   LV  D   +  TL + +       S   S ++A   +         +V F 
Sbjct: 195 FLVSADGKVLVHPDKNLVMKTLADVYPKNTPKISADFSEVEANGKDN--------IVTFI 246

Query: 313 PIK-VANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTL 371
           PIK + + NW +        +  D ++   +L+E      R+  ++ T + VV ++ +  
Sbjct: 247 PIKGLPSVNWDL-------GISVDKDKSFAMLSE-----FRTSAVIATFIAVVIIIALLG 294

Query: 372 MAMR-LVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRV 430
           M +R L++P+  +   +QDI+ GEGDLT+RL + + DE G L   FN F++++   IR V
Sbjct: 295 MLIRILMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHTSIREV 354

Query: 431 VDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAA 490
              T  V     +V S   S+  +S+ Q    +SVA A  ++   +  +  NA +A + A
Sbjct: 355 SSATEHVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQEIARNAAQASHQA 414

Query: 491 SDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTN 550
           SDA+  A+ G +V+  +   MNQL   ++ +   +E L      I +IL VI  IS+QTN
Sbjct: 415 SDARHLAEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQILEVITSISQQTN 474

Query: 551 LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQ 610
           LLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S  +++ +I ++++G ++ V  + 
Sbjct: 475 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARESVSTMG 534

Query: 611 GSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRD 670
            S   +  + +    A  +LN V   I  I+ M+  +  A ++Q +V   +   +  I  
Sbjct: 535 ESQRHSLESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDITEINT 594

Query: 671 LSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           L+ + +   +++ +    + + +   + LVG F++
Sbjct: 595 LNQEGVENLQSTLRACADLEQQAARLKQLVGSFRI 629