Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  218 bits (555), Expect = 6e-61
 Identities = 130/351 (37%), Positives = 199/351 (56%), Gaps = 4/351 (1%)

Query: 355 LMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQ 414
           ++V T +V +GL V  L+   +V P+    +  Q ++SG  DLT  + V   DE  +L Q
Sbjct: 195 MIVLTALVTIGLAV--LLTRSIVLPLAQSLKVAQGVASG--DLTGEISVCGRDEPARLQQ 250

Query: 415 GFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQ 474
                 + L+  IRR+ +++ Q+ S +E++    E   R    Q +E++  ATA  +MT 
Sbjct: 251 ALKSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQSQEIEQAATAVNQMTA 310

Query: 475 TSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTG 534
               V  NA     A+ ++ R AQ G E ++ + + +  L   +   V  VE+LA+   G
Sbjct: 311 AVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDNVTQVEDLAQKVYG 370

Query: 535 IIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSV 594
           I ++L VI  I+EQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ S  EI  +
Sbjct: 371 ISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQM 430

Query: 595 INKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQ 654
           I+ ++ GT   V ++Q SN  A++T +    A T L  + SA   INE +  I  A++ Q
Sbjct: 431 ISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIASAFTLINERNLVIASASEQQ 490

Query: 655 QTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
             V+ +V ++++NIRDL+ Q  +    +      ++RL+ +  TLV +F V
Sbjct: 491 AAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLVARFSV 541