Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  216 bits (549), Expect = 4e-60
 Identities = 155/515 (30%), Positives = 262/515 (50%), Gaps = 27/515 (5%)

Query: 194 PCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQG 253
           P +T P M     G  + T +++P+  +G  +G  G DL+L  L+ I    D   F G G
Sbjct: 136 PMLTPPYMAA--VGGQIVT-IAMPVKKNGELLGVVGGDLSLQTLVKIINSVD---FGGIG 189

Query: 254 KVSIVSENNALVASDAAFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVV-FA 312
              +VS +  ++ S      +      +NL      + ++  +V+     +GQ  ++ F 
Sbjct: 190 HAFLVSSDGQVIVSPEQDQVM------KNLKDIYPGTQVRIEKVSQDVVLNGQDRILSFT 243

Query: 313 PIK-VANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVV-T 370
           PI  +   +W I   + +        +             R+  ++  L+ VV + V+ +
Sbjct: 244 PISGLPGADWYIGLSIDKDKAYAPLGKF------------RTSALIAMLIAVVAIAVLLS 291

Query: 371 LMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRV 430
           L+   L+RP+  +   +QDI+ GEGDLT+RL V S DE G++   FN F++++   I  V
Sbjct: 292 LLIQVLLRPLTTMGVAMQDIAQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASISEV 351

Query: 431 VDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAA 490
              T QV   +++V ++  ++   S+ Q    +SVA A  E+   +  +  NA  A   A
Sbjct: 352 SSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHA 411

Query: 491 SDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTN 550
           S A   A  G +V+  + + M++L  +++L+   +E L  +   I  IL VI+GIS+QTN
Sbjct: 412 SGASEQADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTN 471

Query: 551 LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQ 610
           LLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ S  EI  +I  +++G+++ V  + 
Sbjct: 472 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMN 531

Query: 611 GSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRD 670
            S  +++ + E    A  +L  V   I  I+ M+  +  A ++Q  V   +   +  I  
Sbjct: 532 ASQTSSEESVEVANQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINL 591

Query: 671 LSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           L+ Q ++    + K  + +++ +   + LV  FK+
Sbjct: 592 LNQQGVANLNETLKDCDALSQQANRLKQLVDSFKI 626