Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (593), Expect = 3e-65
 Identities = 161/489 (32%), Positives = 263/489 (53%), Gaps = 33/489 (6%)

Query: 222 GVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETFQSE 281
           G  +G    D++LA L  +   ++  LFD  G V IVSE+   +A              +
Sbjct: 164 GQFLGSIFYDVSLAELAELV--NEVKLFDA-GYVFIVSEDGTTIAHP-----------KK 209

Query: 282 NLSRSTVSSLLQAGQVNTQWSE---DGQ-WLVVFAPIKVANQNWGIIFEMPRQSVMQDAE 337
             +   +S  L   ++N    +   +G+ + V F+ ++  +   G++ +          E
Sbjct: 210 EFNGKPMSEFLGESKINVDTHQVIINGKPYAVSFSDVEGEDWYVGVVID----------E 259

Query: 338 QLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDL 397
           ++     ++L R   S L+   + +V+ + V+  +   L++P+  + + +Q+++SGEGDL
Sbjct: 260 EIAYAALDELRR---STLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGEGDL 316

Query: 398 TQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEA 457
           TQRL  N+ +E  +LA GFN F + LQ  + +      +++  +E    T++ +  +  +
Sbjct: 317 TQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRS 376

Query: 458 QFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDR 517
           Q  E++ +ATA  EM  TS+ V  NAQ A +AA  A  AA  G +V+  +   ++ L   
Sbjct: 377 QLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSAT 436

Query: 518 MNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 577
           ++ AV  V+ L      I  +L VI  I++QTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 437 IDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEV 496

Query: 578 RSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAI 637
           R+LA RTQ S  EIR++I K++ G   V  A+  S +TA +   Q   A   L ++  AI
Sbjct: 497 RTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAI 556

Query: 638 HAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQIL-SETEASEKVGEQIARLSFEQ 696
             I++M+ QI  AA++Q  V+ ++  + V I+DLS Q+  S  EA+  +  Q   +  EQ
Sbjct: 557 QQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTENIR-EQ 615

Query: 697 QTLVGQFKV 705
             ++ +FKV
Sbjct: 616 DAILNKFKV 624