Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  223 bits (569), Expect = 2e-62
 Identities = 154/511 (30%), Positives = 252/511 (49%), Gaps = 37/511 (7%)

Query: 206 TGRYLATSLSVPILIDGVAIGFYGIDLTLAPLIG--ITQKSDNN----LFDGQGKVSIVS 259
           TG  L T ++ P+ ++G   G  G D+ +  LI   I+  +  N    L DGQ       
Sbjct: 147 TGALLVT-IAEPVRLNGNMSGVVGADVLIDQLIADVISMDAGKNAQTMLIDGQN------ 199

Query: 260 ENNALVASDAAFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAPIKVANQ 319
             + L   D + L    T  S  L   T+      G++                +K+   
Sbjct: 200 -GSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGEL--------------LALKLNGV 244

Query: 320 NWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRSELMVGT-----LMVVVGLLVVTLMAM 374
                F     +    A Q+D       E    SEL+ G      L+ V+ +++V+ +  
Sbjct: 245 EKFFFFTAVPDTPWYFAVQMD----SDTEYASHSELLTGLITTALLITVIVVVIVSWLVS 300

Query: 375 RLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNT 434
            L R +  V++ L++I+SG+ DLTQRL+  S DE+GQLA  FN F+  +  ++ ++   +
Sbjct: 301 FLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVS 360

Query: 435 GQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQ 494
             +   ++   +  E        Q  E++ VATA  EM   +  +  NA      A +A 
Sbjct: 361 AALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAV 420

Query: 495 RAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLAL 554
            A   G   +  +Q  +  L + + +A  V++EL  +   I  ILS I+ I+EQTNLLAL
Sbjct: 421 TACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLAL 480

Query: 555 NAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNE 614
           NAAIEAARAGEQGRGFAVVADEVR L+ RT AS  EI+ +I  ++  T   V  +  S  
Sbjct: 481 NAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRR 540

Query: 615 TAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQ 674
            A  + +   +A   L ++   +  I++M+ QI  AA++Q +V++++T++ V IRD+S  
Sbjct: 541 LADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSND 600

Query: 675 ILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           +  E  ++ +   +++ LS E +  + +FK+
Sbjct: 601 LAQEAHSAAEQAAELSELSHELEQEIRRFKL 631