Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  211 bits (537), Expect = 8e-59
 Identities = 124/364 (34%), Positives = 194/364 (53%), Gaps = 4/364 (1%)

Query: 346 QLERGIRSELMVGTLMVVVGL----LVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRL 401
           Q E  +  +++    + VVGL    + V+++  R + P++ V   LQ +++G GDLT R+
Sbjct: 201 QREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARI 260

Query: 402 QVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKE 461
           +V S DEIG +A+ FN FMDKL P++  +  +   V +  +++           +    E
Sbjct: 261 KVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLE 320

Query: 462 VDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLA 521
            D V  A  EM+ T+  V  N      A   A        + +  +   + +LV+ +N  
Sbjct: 321 TDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQT 380

Query: 522 VPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 581
              V +L++    I ++L VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA
Sbjct: 381 SAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 440

Query: 582 SRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAIN 641
           SRTQ S  EI  ++N +  G    V+++  S E  + TA +       L  +  A+  I+
Sbjct: 441 SRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIH 500

Query: 642 EMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVG 701
           +M  Q   AA+ Q  V+  + Q++V I+ +  ++    + +E V   ++    +  TLVG
Sbjct: 501 DMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVG 560

Query: 702 QFKV 705
            FK+
Sbjct: 561 HFKL 564