Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  214 bits (545), Expect = 1e-59
 Identities = 127/352 (36%), Positives = 203/352 (57%), Gaps = 8/352 (2%)

Query: 357 VGTLMVVVGLLVVTLMAMRLVRPIR---AVAERLQDISSGEGDLTQRLQVNSADEIGQLA 413
           V  L +VVG L   L+ +++ +P+R   AVA R+      +GDL+Q   V   DE+GQL 
Sbjct: 301 VALLAMVVGALAAWLITLQITQPLRQTLAVAARI-----AKGDLSQVDTVQRRDEMGQLQ 355

Query: 414 QGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMT 473
                    L+ +I  +    GQ+     Q+ ++ E T+     Q +E D VATA  +M+
Sbjct: 356 TSMREMTLSLRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMS 415

Query: 474 QTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNT 533
            T   V +NA++A  AA++A + AQ GD+V+  +  ++ QL  +M+  +  ++ LA  + 
Sbjct: 416 ATVQEVAQNAEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQ 475

Query: 534 GIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRS 593
            I  IL VI+ +SEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT  +  EI  
Sbjct: 476 RIGSILDVIKSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQ 535

Query: 594 VINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQD 653
           +I+ +  GT +V + +  S    + + E    A   L+++   + +I  M+ QI  A+++
Sbjct: 536 LIDSLHNGTDEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEE 595

Query: 654 QQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           Q  V+ Q+ +SV+N+RD+S Q  + +E +     ++ +L  + + +VG+F +
Sbjct: 596 QSVVAEQINRSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGRFSI 647