Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  221 bits (563), Expect = 7e-62
 Identities = 143/412 (34%), Positives = 224/412 (54%), Gaps = 8/412 (1%)

Query: 294 AGQVNTQWSEDGQWLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGIRS 353
           AG VN +W + G      A   VA  ++  +F+ P   ++     +D +  E   R +R 
Sbjct: 141 AGPVNYRWPKPG------ASEPVAKTSYIQLFK-PWGWIIGSGVYVDDVQAE-FARQLRD 192

Query: 354 ELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQLA 413
             +VG  + ++  LVV L+A  + RP++   + + +I+SGE DLT+RL  + +DEI  L 
Sbjct: 193 ASLVGVGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRRLDTHGSDEITHLG 252

Query: 414 QGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEEMT 473
           + FN F  KLQ ++ ++      +  +   V     + ++ S  Q  ++D VATA  E+T
Sbjct: 253 EHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSLQMDQVATAVNEVT 312

Query: 474 QTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARNNT 533
                V + A++A      AQ+    G + I  S  Q+++L   ++ AV V+ +LA ++T
Sbjct: 313 YAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDEAVQVIRDLAGHST 372

Query: 534 GIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEIRS 593
            I  +L VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT  S  EI +
Sbjct: 373 RIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTAQSTAEIHT 432

Query: 594 VINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAAQD 653
           +I  ++  +   VKAI  S+E ++ T EQ  +A   L+ +   ++ +  ++  I  A   
Sbjct: 433 MIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNLTALNASIASATLQ 492

Query: 654 QQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           Q  V  ++ ++V++   LS Q       S   G  + RLS E + L+ QF+V
Sbjct: 493 QSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLLRQFRV 544