Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  377 bits (968), Expect = e-108
 Identities = 239/714 (33%), Positives = 377/714 (52%), Gaps = 13/714 (1%)

Query: 3   QISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGALL 62
           +IS+Q KITLLAGLCLV     L+G S+Y    +    K  S + + D +Q  +++   +
Sbjct: 5   KISIQLKITLLAGLCLVGVVSLLMGLSLYRIEHNSDLVKFSSMKMLSDAAQSHIESQGEI 64

Query: 63  NATEISEYLSEAIYRAEMLAANALFLKNNSEENFG-ESEVLRTSLDEMVRKSVLGFDTIE 121
               I    ++A       + +   L  N  EN   +    R S+    +  +     + 
Sbjct: 65  QTLIIRRQFTDAYQYGNGFSRHMQQLLLNQVENSPFQPSAFRESIVFQAKTVLQANPGLL 124

Query: 122 GAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQLTEESN 181
           G  LVF PN LD +D  +V    +GSND G+FA  WT++  GQ + S V+++ +L    N
Sbjct: 125 GISLVFEPNALDGKDEIFVGNTALGSNDKGRFALNWTQSNTGQ-ITSIVISENELDSAKN 183

Query: 182 KE-------RFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLTL 234
                    R  C      PC+  P        + L TS+  P+L+D   +G   +D++L
Sbjct: 184 ASSINQNGTRNTCSRSALKPCVFEPFFSRVNGQKTLVTSIVFPLLVDNKRVGSLLVDISL 243

Query: 235 APLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGE---TFQSENLSRSTVSSL 291
             L  ++Q +   L++GQ  +S+++ +  L         +G+      S++ +       
Sbjct: 244 DGLQSVSQDTSRKLYEGQAGISVITPSGLLAGHSPDVRLVGKYLNAIDSDDAAELVRLLN 303

Query: 292 LQAGQVNTQWSEDGQWLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGI 351
            + G+ + +     + LV F PI   +  WG++ ++P   +++ AE L   L ++   G 
Sbjct: 304 TEPGKHSLKGEARMKTLVTFEPIP-DDAPWGVLLDIPESVLIEPAEVLRRQLDQRNTTGS 362

Query: 352 RSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQ 411
             EL +G L  +VGLL + +MA  + +PI  VA  L+DI+SG+G+LT RL     DE+G+
Sbjct: 363 LVELGLGLLAAIVGLLFIWMMARSVTKPILRVAYMLRDIASGDGNLTLRLAYEKQDELGE 422

Query: 412 LAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEE 471
           L   FN  +DKLQP I  V  +     +T ++  +    T    E Q ++V  V TA++E
Sbjct: 423 LVAWFNSLLDKLQPTIAEVKRSVQAARATADESAAIARQTSNGMEEQSRQVHLVVTASQE 482

Query: 472 MTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARN 531
           M  T+  V  +A +A  AA DA +A + G  VI  +   ++ L   M+ A+  VE LA +
Sbjct: 483 MNATAQDVARSAAQAAKAACDADQATREGLSVIGRTTSSIDHLAADMSEAMSQVESLATH 542

Query: 532 NTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEI 591
           +  I  +L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ SV E 
Sbjct: 543 SEKIGMVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEET 602

Query: 592 RSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAA 651
           R VI  ++ GT+ VV A+  S   A  + +QV+ AVT L+++  A+  I  M+ QI  AA
Sbjct: 603 RIVIEHLQSGTESVVTAMSKSQRLASGSVDQVSQAVTALSQIGDAVTVITSMNLQIASAA 662

Query: 652 QDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705
           ++Q  V+ ++  ++  IRD++  +      S ++ + I +L+ +QQ L+ QF+V
Sbjct: 663 EEQNAVAEEINCNISIIRDVTESMSDRASESARISDSIYKLANQQQVLMNQFRV 716