Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  244 bits (622), Expect = 1e-68
 Identities = 159/500 (31%), Positives = 261/500 (52%), Gaps = 22/500 (4%)

Query: 210 LATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNAL-VASD 268
           LA  +   +  +G  +G  G+ L +  L  +        F   GKV +V  +  + V  D
Sbjct: 164 LALFIDYRVEKEGKLVGVAGMGLRMTELSKLIHDFS---FGEHGKVFLVRNDGLIQVHPD 220

Query: 269 AAFLTLGETFQSENLSRSTVSSLLQAGQV--NTQWSEDGQ-WLVVFAPIKVANQNWGIIF 325
           AAF   G+   +E L       ++  G+   ++++S DG+ +L +  P++  + NW ++ 
Sbjct: 221 AAFS--GKRQLAEQLGADAAKGVMTGGESLRSSRFSRDGERYLALGLPLR--DLNWTLVA 276

Query: 326 EMPRQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAE 385
           E+P   +             Q+ + +    ++G  + +V LL+V L+A  LVRPIR V  
Sbjct: 277 EVPESEIYA-----------QMHQAVWLTSLIGGAVALVSLLLVVLLARGLVRPIRRVTA 325

Query: 386 RLQDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVK 445
            L  I SG GDL+ RL  +  DE+G LA+GFN F+D  + +I  V+  + ++    EQV 
Sbjct: 326 ALVQIGSGAGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVT 385

Query: 446 STVESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIR 505
             V++T   S  Q +  + VATA  EM  T   +  NA  A  A+  A+  A    EV++
Sbjct: 386 QVVDNTAERSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQ 445

Query: 506 HSQMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGE 565
            S   +  +   +  A   V +LA     + E+L+VI  ISEQTNLLALNAAIEAARAGE
Sbjct: 446 RSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGE 505

Query: 566 QGRGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVAD 625
            GRGFAVVADEVR+LA RTQ S  E++ +I +++LG    V ++Q   +   +  E    
Sbjct: 506 MGRGFAVVADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQR 565

Query: 626 AVTQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKV 685
               L+ +   +  I++M+HQ+  A ++Q  V+ ++ ++V  I DL+ +  +E +   + 
Sbjct: 566 TGASLSAITDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISDLARETAAEVQGCREE 625

Query: 686 GEQIARLSFEQQTLVGQFKV 705
            + +  L+ +    +G F++
Sbjct: 626 CQALRGLADDLARQMGGFRL 645