Pairwise Alignments

Query, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  233 bits (593), Expect = 3e-65
 Identities = 159/498 (31%), Positives = 262/498 (52%), Gaps = 22/498 (4%)

Query: 210 LATSLSVPILIDGVAIGFYGIDLTLAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDA 269
           L  +++ P+  DG  +G  G D+ LA    I Q  ++  F G G   +VS    ++    
Sbjct: 153 LVITIATPVRRDGQMVGVAGADMDLA---SIAQLLESLKFQGHGHAFLVSAQGKVLLHPD 209

Query: 270 AFLTLGETFQSENLSRSTVSSLLQAGQVNTQWSEDGQWLVVFAPIK-VANQNWGIIFEMP 328
           +  TL +    E   + T    +QAG    +     Q+ + F P++ + + NW +     
Sbjct: 210 SNYTLKDI--QELYPQDTPR--VQAGVSEVEVDGKTQF-IAFTPLEGLPSANWYV----- 259

Query: 329 RQSVMQDAEQLDILLTEQLERGIRSELMVGTLMVVVGLLVVTLMAMR-LVRPIRAVAERL 387
             +++ D +     L E      R+  +V T++ V+  + +  M +R L++P+  + + +
Sbjct: 260 --ALVLDQDAAFAALGE-----FRTSAVVATIVAVIATVFLLGMLIRVLMQPLLLMGKAM 312

Query: 388 QDISSGEGDLTQRLQVNSADEIGQLAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKST 447
           +DI+ G+GDLT+RL V S DE G+LA  FN F++++   IR V   TGQ+    + V + 
Sbjct: 313 RDIAQGDGDLTKRLSVQSQDEFGELATSFNQFVERIHGSIREVSSATGQLNEVAKLVVNA 372

Query: 448 VESTRRSSEAQFKEVDSVATAAEEMTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHS 507
             S+  +S+ Q    +SVA A  E+   +  +  NA  A N ASDA+  A+ G +V++ +
Sbjct: 373 SNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASNQASDARHLAEDGSQVLQKT 432

Query: 508 QMQMNQLVDRMNLAVPVVEELARNNTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQG 567
            + MN+L ++++ +   +E L      I +IL VI+ IS QTNLLALNAAIEAARAGE G
Sbjct: 433 IVAMNELSEKISASSANIEVLNSKTVDIGQILEVIKSISAQTNLLALNAAIEAARAGEAG 492

Query: 568 RGFAVVADEVRSLASRTQASVGEIRSVINKVELGTQDVVKAIQGSNETAQATAEQVADAV 627
           RGFAVVADEVRSLA RTQ S  EI  +I ++++G +D V  +  S   +  + E    A 
Sbjct: 493 RGFAVVADEVRSLAHRTQESAQEIHKMIEELQVGARDSVTTMTESQHYSAQSVEIANQAG 552

Query: 628 TQLNRVFSAIHAINEMSHQIVQAAQDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGE 687
            +L  V   I  I+ M+  +  A ++Q  V   +   +  I  L+ + +   +A+ +   
Sbjct: 553 ERLGSVTQRIGEIDGMNQSVATATEEQTAVVEALNMDINEINTLNQEGVENLQATLRACG 612

Query: 688 QIARLSFEQQTLVGQFKV 705
            + R +   Q LVG F++
Sbjct: 613 DLERQAARLQQLVGSFRI 630