Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., Transmembrane protein YfcA from Sphingobium sp. HT1-2

 Score =  157 bits (397), Expect = 2e-43
 Identities = 95/260 (36%), Positives = 136/260 (52%), Gaps = 24/260 (9%)

Query: 5   IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAA 64
           + P TI  L   AF+AG IDA+AGGGG++ +PALL+ G+PP  A+ TNKL +   +  A 
Sbjct: 3   LSPETIAFLMAAAFMAGCIDAMAGGGGLIALPALLAAGVPPVPAVATNKLQSCLGTFGAC 62

Query: 65  WTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRP 124
             Y R+   D A +K   IA  IG+I G   +  +    L  ++P +++A A Y      
Sbjct: 63  VAYARRGHMDLATYKGPVIAAFIGSIGGAWLLQRVDPSILAGLMPALLIAMAAYFTFS-- 120

Query: 125 HQTEQSVTPEPCPKL-----HRKQILQGIG-----LGFYDGLAGPGTGAFWTVSSMALYR 174
                       PKL     H +  L G+      +GFYDG  GPG GAF+T   +AL  
Sbjct: 121 ------------PKLSDADRHARVGLWGLSGMIGVVGFYDGFFGPGAGAFYTSIFIALGG 168

Query: 175 FNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAP 234
            ++L A+   KA N  SN   L+T    GH+ W+ GL M V  + G  +G+H A+RFG+ 
Sbjct: 169 LSLLRATAQTKAANFASNVAGLLTMVAGGHVIWIAGLAMAVGSITGGQIGSHLAMRFGSK 228

Query: 235 FIRPLFILVVTILAGKLAYD 254
            I+PL I++   L  K+  D
Sbjct: 229 LIKPLLIIMSLALTTKMLLD 248