Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  140 bits (353), Expect = 3e-38
 Identities = 88/255 (34%), Positives = 138/255 (54%), Gaps = 19/255 (7%)

Query: 10  IMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLP---PHLALGTNKLAATFASSTAAWT 66
           I VL++ AF AG IDA  GGGG++ +PAL ++ LP   P   LG+NKLA+   ++ AA +
Sbjct: 4   IAVLSVFAFAAGLIDAAVGGGGLIQIPALFNV-LPSAQPAALLGSNKLASVCGTAFAARS 62

Query: 67  YYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYT------- 119
           + R+   D      A ++  + +  G   V  +    +R  + ++I+  A+YT       
Sbjct: 63  FIRKVTLDWGLIVPAALSAFVMSFAGAATVSLVPPSVMRPAVLVLIVLMAVYTFCKKDFG 122

Query: 120 VLHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILL 179
            LH P Q  +    E C       +L G  +GFYDGL GPGTG+F     +  +  + L 
Sbjct: 123 TLHTPAQVGRK---EQC-----LAVLIGGAIGFYDGLFGPGTGSFLIFLFIRFFALDFLH 174

Query: 180 ASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPL 239
           AS  AK +N+ +N  +LV F   G++ + + L M VC + GA  G   A+R GA F+R L
Sbjct: 175 ASASAKVVNIATNLAALVFFVPTGNVLYAIALPMAVCNILGALTGTWLAVRKGAGFVRGL 234

Query: 240 FILVVTILAGKLAYD 254
           F++++ +L  KL++D
Sbjct: 235 FLVLLCVLIAKLSWD 249