Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  124 bits (312), Expect = 2e-33
 Identities = 73/250 (29%), Positives = 126/250 (50%), Gaps = 26/250 (10%)

Query: 10  IMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTYYR 69
           +++L  +AF+AGF+D++AGGGG+  VP  L +G+PP +ALG  KL +T  +  A   +  
Sbjct: 20  VLILGAIAFVAGFVDSIAGGGGLFLVPGFLLVGMPPQVALGQEKLVSTLGTLAAIRNFLA 79

Query: 70  QKLFDPACWKRAFIA---TLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRPHQ 126
                   W+ A +    +L+GA LG   + +IS + + K++  +I    L  +  +   
Sbjct: 80  NSKM---VWQVALVGVPFSLLGAYLGAHLIVSISQETVGKIILALIPLGILIFLTPKDRP 136

Query: 127 TEQ---------SVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNI 177
            E+         +V P  C           + +GFYDG  GPGTG+ + ++   L R ++
Sbjct: 137 VEERELSSRMLFTVVPLTC-----------LAIGFYDGFFGPGTGSMFIIAFHYLLRMDL 185

Query: 178 LLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIR 237
           + +S  +K  N  SN  +LV F   G + +LL L +  C + G ++G+  A+R G   +R
Sbjct: 186 VSSSANSKTFNFASNIGALVAFVSAGKVVYLLALPLVACNILGNHLGSSLALRKGNDVVR 245

Query: 238 PLFILVVTIL 247
              +  +  L
Sbjct: 246 KALVFSMLCL 255