Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., Putative membrane protein YfcA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  156 bits (394), Expect = 5e-43
 Identities = 87/262 (33%), Positives = 144/262 (54%), Gaps = 25/262 (9%)

Query: 5   IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAA 64
           + P  ++VL  VA +AGFID++AGGGG+LT+PAL++ G+ P  AL TNKL A   S +++
Sbjct: 10  VSPLLLVVLFFVAVLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSLSSS 69

Query: 65  WTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRP 124
             + R+K+ + A  K   + T IG++ G L V  +  D LR++LP++++   LY +L   
Sbjct: 70  LYFIRRKVVNLAEQKLNILMTFIGSMSGALLVQHVQADILRQILPILVIFIGLYFLL--- 126

Query: 125 HQTEQSVTPEPCPKLHRKQ-----------ILQGIGLGFYDGLAGPGTGAFWTVSSMALY 173
                       PKL  +            ++ G  +GFYDG  GP  G+F+ ++ + L 
Sbjct: 127 -----------MPKLGEEDRQRRLYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLC 175

Query: 174 RFNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGA 233
            +N+  ++  AK +N TSN   L+ F + G + W  G  M V    GA +G+   +  G 
Sbjct: 176 GYNLAKSTAHAKVLNATSNVGGLLLFIIGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQ 235

Query: 234 PFIRPLFILVVTILAGKLAYDA 255
             IRP+ ++V  +++ +L YD+
Sbjct: 236 KLIRPMIVIVSAVMSARLLYDS 257