Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., TSUP family transporter from Dickeya dadantii 3937

 Score =  172 bits (435), Expect = 8e-48
 Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 21/271 (7%)

Query: 2   MEW--IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFA 59
           MEW  + P  + +L L + IAGF+D++AGGGG+L++P LL+ GL P   L TNKL A   
Sbjct: 1   MEWFVVGPDVLALLFLASVIAGFVDSIAGGGGLLSIPVLLAAGLSPAQVLATNKLQAVGG 60

Query: 60  SSTAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYT 119
           S +A+  + R+K  D    K A   T +GA+ G   +  I  D+LRK+LP++++   LY 
Sbjct: 61  SLSASLYFIRRKAVDMKILKLAVPLTFVGAMFGAWLIQQIHADFLRKLLPVLVIGIGLYF 120

Query: 120 VL-----HRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYR 174
           +L             S+ P          +L G  +GFYDG  GPG G+F+ ++ + L  
Sbjct: 121 LLMPKVGDEDRHARMSLLP--------FSLLGGASVGFYDGFFGPGAGSFYALAYVTLLG 172

Query: 175 FNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAP 234
           FN+  A+  AK +N TSNF SL+ F L G + W +GL M V  + GA +GA   +  G  
Sbjct: 173 FNLAKATAHAKVLNFTSNFGSLLFFMLGGQVVWGVGLVMLVGQIIGARLGARMVLTKGQK 232

Query: 235 FIRPLFILVVTILAGKLAYD------AWWVG 259
            IRP+ +++  +++ KL +D      A W+G
Sbjct: 233 LIRPMLVIMSALMSIKLIHDNHGSEIARWLG 263