Pairwise Alignments

Query, 259 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 269 a.a., TauE/TSUP family inner membrane protein from Escherichia coli BL21

 Score =  157 bits (398), Expect = 2e-43
 Identities = 90/262 (34%), Positives = 140/262 (53%), Gaps = 25/262 (9%)

Query: 5   IEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAA 64
           + P  + VL  VA +AGFID++AGGGG+LT+PAL++ G+ P  AL TNKL A   S +A 
Sbjct: 10  VSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISAT 69

Query: 65  WTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRP 124
             + R+K+   +  K     T +G++ G L V  +  D LR++LP++++   LY +L   
Sbjct: 70  IYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLL--- 126

Query: 125 HQTEQSVTPEPCPKLHRKQ-----------ILQGIGLGFYDGLAGPGTGAFWTVSSMALY 173
                       PKL  +            ++ G  +GFYDG  GP  G+F+ ++ + L 
Sbjct: 127 -----------MPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFGPAAGSFYALAFVTLC 175

Query: 174 RFNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGA 233
            FN+  A+  AK +N TSN   L+ F L G + W  G  M V    GA +G+   +  G 
Sbjct: 176 GFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQ 235

Query: 234 PFIRPLFILVVTILAGKLAYDA 255
             IRP+ ++V  +++ KL YD+
Sbjct: 236 KLIRPMIVIVSAVMSAKLLYDS 257