Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., DinG family ATP-dependent helicase YoaA from Variovorax sp. SCN45

 Score =  179 bits (455), Expect = 3e-49
 Identities = 198/719 (27%), Positives = 319/719 (44%), Gaps = 72/719 (10%)

Query: 2   LTKNIQDSIRNSYQN---LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGT 58
           +T  ++D +R+++     L    E F  R  Q  +   +A+T+         +LV EAGT
Sbjct: 1   VTGALEDKVRDAFAQDGALSRAAEQFRERSGQTEMAMAVARTI-----DQGGVLVVEAGT 55

Query: 59  GIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGR 118
           G+GK+ SYL+     A+++  +V++STAT  LQ+QL  +DLP             L KGR
Sbjct: 56  GVGKTFSYLVP----ALLSGERVLLSTATKTLQDQLFGRDLPRLVEAFGLPVRTALLKGR 111

Query: 119 QRYCCSERLAAACGIDDGQIALFESKPKPHETELLAELHTALSQGKWDGDRDGWPSPISD 178
             Y C  RL  A            S P+      LA++    S+    GD    P    D
Sbjct: 112 GSYLCLHRLDTA--------RHDASLPERGSLRTLAKIEQ-WSKATRTGDLAELPG--LD 160

Query: 179 E---LWSVIVSDKHSCNGSFSVH-RHCPFQKARSELDKADVIIANHSLVMAD-ADLGGGV 233
           E   L  +I S + +C G+     + C    AR E   AD+++ NH L  AD A    G+
Sbjct: 161 ERSPLIPLITSTRENCLGAQCPQFKACHVNLARREALAADIVVINHHLFFADLAVRETGM 220

Query: 234 ILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWL-EKLNQSLSKFTALGDEKRAE 292
               P  ++ VFDEAH L     +   A      A  +  + L   L     L D ++  
Sbjct: 221 AELLPTVSVVVFDEAHQLNETGVQFLGAQLGSGQALDFARDMLGSGLQHARGLVDWQQLV 280

Query: 293 RFAEEARTAIQYLIPTLNQLP--KQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQK 350
              E  RTA +  +    Q P  K        EGI      +  Q   D+ Q   + + +
Sbjct: 281 SGVE--RTARELRLVVGKQWPGAKLRWLGPAPEGI----DPDAWQSALDDLQHSFEQAAE 334

Query: 351 AMQSVSKVA-DLIAEKVKEGELATRIAEPALG---------ELGFYVQRLENLTQVWQLM 400
            + +VS+++ D +    +  +LA R A  AL          ++G  ++ +E+   +   M
Sbjct: 335 GLATVSEISPDFVRLHERARQLAKRTARFALPCEVDSVRWVDVGSQLRLIESPLDIADAM 394

Query: 401 AK---PNKDKGAPLARWLEVSPEREGDYLVSVSPLEIGWQLDQ-QLWSRCVGAILVSATL 456
            K      D+    A       + E D     S  E   Q D  + W      +  SATL
Sbjct: 395 RKRVLKIVDEAGADADDDGDDSDDELDAYGERSAREAPVQEDGGRAW------VFTSATL 448

Query: 457 RALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKMEMEPQAEGYT---AY 513
               +  +F    G+ D      + L + SPFDY +Q  L +P+   +P    ++   A 
Sbjct: 449 GDEPTLRWFTEPCGLHD-----AEVLRVQSPFDYASQAALYVPRAFPKPNDPSHSQRVAQ 503

Query: 514 LAKKVLCYLQADKANLVLFASYWQMREVAESLKVEF----TKRGWALQVQGEKSRSEILN 569
           LA +    L      LVL  +   +R + +++K +F    T+    + VQGE  +  +++
Sbjct: 504 LAARGAAELGG--RTLVLTTTLRALRTIGDAIKQQFELLETEARPEVLVQGELPKRVLMD 561

Query: 570 KHKKLIEKQKTS-VLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQEL 628
           + ++     +   VL  + SF EG D PG+ L+ ++I K+PF  P  P+ +A ++ ++  
Sbjct: 562 RFREGASAGRAGCVLVASASFWEGFDAPGDALQLVVIDKLPFPPPNDPLVEARSQRLEAQ 621

Query: 629 GGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPPFKR 687
           G + F   ++PEA+  L Q  GRL+R+E DSG + I D R+V+  YG+ LL ALPP +R
Sbjct: 622 GRSSFADYSLPEAAVALKQGAGRLIRRETDSGVLAICDTRLVAMGYGRRLLAALPPMRR 680