Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., DinG family ATP-dependent helicase YoaA from Sphingobium sp. HT1-2

 Score =  120 bits (300), Expect = 4e-31
 Identities = 180/711 (25%), Positives = 282/711 (39%), Gaps = 88/711 (12%)

Query: 26  PRRAQNFLVAEMAKTLCGAYHKST-QMLVAEAGTGIGKSLSYLMAVIPVAVVNKRKVVIS 84
           PR  Q    A   +      H+    ML+AEAGTGIGK+L YL      A   +  V IS
Sbjct: 197 PRPGQRAYAAAAMEAFRPRTHRDQPNMLLAEAGTGIGKTLGYLAPASLWAAQAQGTVWIS 256

Query: 85  TATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAAC-GIDDGQIALFES 143
           T T ALQ QL  + L L+   +      ++ KGR+ Y C   L  A  G   G+ A+   
Sbjct: 257 TYTKALQRQLDRESLRLFPDPATAARRVVVRKGRENYLCLLNLEDALQGGFAGRAAIL-- 314

Query: 144 KPKPHETELLAELHTALSQGKW-DGDRDGWPSPISDELWSVIVSDKH-SCNGSFSVH-RH 200
                  +L+A        G    GD  GW   +     S  ++D+   C  +   H R 
Sbjct: 315 ------AQLVARWAAFSKDGDMVGGDLPGWLPILFRRNGSTALTDRRGECIYAGCPHYRK 368

Query: 201 CPFQKARSELDKADVIIANHSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVAREHAS 260
           C  +++     +AD++IANH+LVM +A  G             VFDE HHL   A    S
Sbjct: 369 CFIERSARASAEADIVIANHALVMINAARGRET---GQRPQRIVFDEGHHLFDAADSTFS 425

Query: 261 AAATLKGAAS---WLEKLNQSLSKFTALGDEKRAERFA---EEARTAIQYLIPTLNQLPK 314
            A + + A     W+    +  S+    G   R    A   EE   AI+  +     LP 
Sbjct: 426 VALSGQEAIELRRWVMG-PEGGSRGRRRGLAARLSDLASYDEEGGEAIRTAVEAARALPA 484

Query: 315 QFMAEQFVEG------------------IYRFEHGE------LPQWLADESQALSKSSQK 350
               ++ V G                      + GE      L   LA+    L +++Q+
Sbjct: 485 DDWLKRIVAGEPFGPLEELLATVRGTVFARAADSGEADAGYGLETELAEPDGPLVEAAQE 544

Query: 351 A----------MQSVSKVADLIAEKVK---EGELATRIAEPALGELGFYVQRLENLTQVW 397
           A          +  +SK  + + E      +G    RI E A+G LG+      +L   W
Sbjct: 545 AAIALDALLKPLVRLSKRLEAVLEDAPDWLDGAARARI-EGAIGSLGW----RRDLISAW 599

Query: 398 -QLMAKPNKDKGAPLARWLEVSPEREGDYLVSVSP--LEIGWQLDQQLWSRCVGAILVSA 454
             L+A+           W+ V      +Y + +    L+    L + +     G I+ SA
Sbjct: 600 LALLARIGGPADPDFVDWMTVDRVEGREYDIGLHRHWLDPTRPLAEAVLQPAQGVIVTSA 659

Query: 455 TLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKMEMEPQAEGYTAYL 514
           TL+    +     ++G++  +    +F A ASPFDYP + E+LI    +     G  A +
Sbjct: 660 TLKGGGDWSNAEARSGVTHLSHSAERFEA-ASPFDYPGRAEVLI----VTDIKRGDIAAM 714

Query: 515 AKKVLCYLQAD-KANLVLFASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKK 573
           +      ++A     L LF +  ++R V   +     + G  L  Q              
Sbjct: 715 SGAYARLIEASGGGTLGLFTAIRRLRAVHARIADRLARAGLPLYAQHVDPMD--TGTLVD 772

Query: 574 LIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPF 633
           +      + L GT +  +G+D+PG  L  +++  +P++ PT      HA      GG+ +
Sbjct: 773 IFRDDPRASLLGTDALRDGVDVPGHSLRLVVMEGVPWSKPT----VLHAARRLAGGGSAY 828

Query: 634 MQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPP 684
               +     +L Q+ GRL+R+  D G  VIL   + S+     LL A PP
Sbjct: 829 DDRLI---RARLAQAFGRLIRRAEDKGSFVILSAAMPSR-----LLSAFPP 871