Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 762 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 587 GSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLI 646
           G+F EG+DLPG  L    +  +      +PV +   + +    G  F    +    +K+I
Sbjct: 663 GAFGEGVDLPGTRLIGAFVATLGLP-QVNPVNEQFKQRLGRQFGAGFDYAYLYPGVRKVI 721

Query: 647 QSVGRLLRKERDSGRVVILDRRVVSKR 673
           Q+ GR++R ++D G +V++D R    R
Sbjct: 722 QAAGRVIRGDQDRGVLVLIDERFAEPR 748



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 14/112 (12%)

Query: 198 HRHCPFQKARSELDKADVIIANHSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVARE 257
           H+ CP+   +     ADV++A+++       L  G+          + DEAH+L    R 
Sbjct: 331 HQVCPYYLGQEMARWADVLVADYNYYFDAHALLFGLTQLNQWRVAVLVDEAHNLVERGRG 390

Query: 258 HASAA-----------ATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEA 298
             SA+           +   G  S L++LN+   ++ AL  E+RA   A E+
Sbjct: 391 MYSASLDQGQLLALRQSKPPGLVSALDRLNR---QWNALYKEQRAPYQASES 439



 Score = 26.2 bits (56), Expect = 0.006
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 36  EMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAV 75
           ++A+TL  A   + + L+A+A TGIGK+L  L  ++   V
Sbjct: 198 QLAETLYKAV-STGRCLMAQASTGIGKTLGTLFPLLKAMV 236