Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., putative Helicase from Pseudomonas putida KT2440

 Score =  437 bits (1123), Expect = e-126
 Identities = 278/728 (38%), Positives = 408/728 (56%), Gaps = 54/728 (7%)

Query: 1   MLTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTL----C---GAYHKSTQMLV 53
           M++  ++ +I+ +Y     + ++  PR  Q  ++AE+AK L    C   G       ++ 
Sbjct: 1   MISNELKATIQGAYSRFL-EAKSLKPRYGQRLMIAEVAKVLGDIACDDEGRRAGEPAVVA 59

Query: 54  AEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFI 113
            EAGTG GK+++Y +A IP A    +++VI+TATVALQEQ++ KDLP   R S  NFSF 
Sbjct: 60  VEAGTGTGKTVAYSLAAIPAAKAAGKRLVIATATVALQEQIVFKDLPDLMRSSGLNFSFA 119

Query: 114 LAKGRQRYCCSERLAAACGIDDGQIA---LFESKPKPHETE-----LLAELHTALSQGKW 165
           LAKGR RY C  +L         Q A   LFE +    E +     L   +   L+  +W
Sbjct: 120 LAKGRGRYLCLSKLDILLQEGHAQSATAQLFEEEGFRIEVDERSQKLFNSMIEKLAGNRW 179

Query: 166 DGDRDGWPSPISDELWSVIVSDKHSCNGSFSVHRHCP------FQKARSELDKADVIIAN 219
           DGDRD WP  + D+ W+ + +D   C G     RHCP      F KAR  + K DVI+ N
Sbjct: 180 DGDRDSWPEALEDQDWARLTTDHSQCTG-----RHCPNFQQCVFYKAREGMGKVDVIVTN 234

Query: 220 HSLVMADADLGGGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSL 279
           H +V+AD  LGGG +LP P +T+YVFDE HHLP  A  H +  + L+  A WLE+  ++L
Sbjct: 235 HDMVLADLALGGGAVLPDPRDTMYVFDEGHHLPDKAIGHFAHYSRLRSTADWLEQTAKNL 294

Query: 280 SKFTAL----GDE----KRAERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGI----YR 327
           +K  A     GD     ++    A E RT  Q++  TL +    F   +  EG     YR
Sbjct: 295 TKLLAQHPLPGDLGKYIEQVPELAREVRTQQQFMF-TLCEQVADFRPSEDTEGRERPRYR 353

Query: 328 FEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGE----L 383
           FE G +P+ + +    L K   +     +++ADL+ E + +GE+   IA     E     
Sbjct: 354 FEGGVVPEQIREVGIELKKGFARLNDLFTRLADLLKEGM-DGEVNIGIASHQAEEWYPLF 412

Query: 384 GFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPERE-GDYLVSVSPLEIGWQLDQQL 442
           G  V R +   ++W      + +   P+ARWL ++      D  V+ SP+     L + L
Sbjct: 413 GSLVTRAQGNWELWTAFTAEDPEDSPPMARWLTLAESGALFDIEVNASPILAADMLRRSL 472

Query: 443 WSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKME 502
           WS   GA++ SATL AL  F  F  ++G+   A   V    + SPF +   G L +P ++
Sbjct: 473 WSVAHGALVTSATLTALGKFDRFRMRSGLPRDAVTCV----VPSPFVHGDAGLLRVPDLQ 528

Query: 503 MEPQ-AEGYTAYLAKKVLCYLQADKANLVLFASYWQMREVAESLKVEFTKRGWALQVQGE 561
            +P+ A  +TA + +++   ++  +  LVLF+S  QM++V + L  ++ K    + +QG 
Sbjct: 529 ADPRDAAAHTAAIIRELPNIVEDARGALVLFSSRKQMQDVFDGLDRDWRK---LVLIQGN 585

Query: 562 KSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAH 621
            S+ E LNKHK  ++  + SVLFG  SF+EG+DLPG   E+++I KIPFAVP  PVE A 
Sbjct: 586 LSKQETLNKHKARVDDGQHSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVPDDPVEAAL 645

Query: 622 AEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDA 681
           AE+I+  GGNPFM+I VP+AS KLIQ+ GRLLR E+D G + +LDRR+V++RYGKA+L+A
Sbjct: 646 AEWIEARGGNPFMEIAVPDASLKLIQACGRLLRTEQDRGVITLLDRRLVTQRYGKAILNA 705

Query: 682 LPPFKRTI 689
           LPPF+R I
Sbjct: 706 LPPFRREI 713