Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 777 a.a., ATP-dependent helicase DinG/Rad3 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  326 bits (835), Expect = 3e-93
 Identities = 248/734 (33%), Positives = 359/734 (48%), Gaps = 89/734 (12%)

Query: 27  RRAQNFLVAEMAKTLCG-----------AYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAV 75
           R  Q  + A +A TL G           A   +  + V +AGTG+GKS +Y   VIP+A+
Sbjct: 47  RPGQREMAAHIAHTLSGVSLGDGAVASDAALPARGIAVVQAGTGVGKSAAYASTVIPLAL 106

Query: 76  VNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDD 135
             +++V+ISTATVALQEQL+ KDLP       Q FSF LAKGR RY C  +L    G D 
Sbjct: 107 AQQKRVIISTATVALQEQLIAKDLPALAASLPQPFSFALAKGRGRYVCRLKLDQLSGGDA 166

Query: 136 GQIALFESKPKPHETELLAELHT------------------------ALSQGKWDGDRDG 171
               LFES          A +                          AL  G WDGDRD 
Sbjct: 167 ASADLFESDDGSASDTSAAGVAAQAVASAAAAARWQERGVQYTAWADALDDGSWDGDRDR 226

Query: 172 WPSPISDELWSVIVSDKHSCNGSFSVHRHCP------FQKARSELDKADVIIANHSLVMA 225
             +P    LW  + +++H+C       RHCP      + +AR+ L +A VI+ NH L+++
Sbjct: 227 LDTPPDGGLWGPVAAERHTCTA-----RHCPSYNSCSYYQARARLAQAQVIVVNHDLLLS 281

Query: 226 DADLGGGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTAL 285
              L     LPAP++   VFDEAHHL +VA+   +A+  L     WL+KL +++ +    
Sbjct: 282 TLGLHA---LPAPQDCYLVFDEAHHLGSVAQGQFTASMDLM-RGHWLDKLPRAVDEVATA 337

Query: 286 GDEKRAERFA-----------EEARTAIQYL--IPTLNQL--------PKQFMAEQFVEG 324
            D +     A           E AR A+Q +  +P    L        P +     F E 
Sbjct: 338 IDHRPTIDVAAFTKELKSAQTELARLAMQRIGSLPAWLDLTGRSAGRSPARPGGGAFNEA 397

Query: 325 ----IYRFEHGELP-QWLADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAE-- 377
               + RFE G LP +WL    +  + +S       +  A L A   +    A R A+  
Sbjct: 398 GAPVVDRFEGGVLPAEWLEVVGKLHANASSLLKVFEALAAQLKANARENPGDAARFAKLY 457

Query: 378 PALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYLVS-VSPLEIGW 436
             LG L   +Q  +     WQ +A    D   PLA+WLE         L +   PL+ G 
Sbjct: 458 SRLGVLAPRLQSAQETASYWQQVAG---DGQPPLAKWLEAGVSHGLVTLTAHACPLQPGS 514

Query: 437 QLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDG-VQFLALASPFDYPTQGE 495
            L   LW++   A++ SA+L    +F  F  ++G+   A DG V    + SPFD+  QG 
Sbjct: 515 LLRNHLWNQVRAAVVTSASLTTCGTFDHFLHESGL---AWDGAVAAREVQSPFDHARQGR 571

Query: 496 LLIPKMEMEPQ-AEGYTAYLAKKVLCYL-QADKANLVLFASYWQMREVAESL-KVEFTKR 552
           L++ +   +P+  +GYT  +   ++  L + ++  LVLF S  QMR+    L + E    
Sbjct: 572 LVVVQTTADPKDVDGYTREMLALLMADLREVERGALVLFTSRAQMRQAQGLLERGEHGAL 631

Query: 553 GWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAV 612
              + VQGE SR+ +L +H + + + K SVLFG  SF EGLDLPGEL E + ITK+PFA 
Sbjct: 632 RDRVLVQGEASRTVLLRRHAERVAEGKPSVLFGLQSFGEGLDLPGELCEWVFITKLPFAS 691

Query: 613 PTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSK 672
           P+ PV QA A++++  G +PF ++ VP    +L+Q  GR LR E D   VV  D R++ +
Sbjct: 692 PSDPVGQARADWLKSQGRDPFSELVVPATGARLLQWTGRALRTEADEAVVVCYDARLLRQ 751

Query: 673 RYGKALLDALPPFK 686
            YG+ +L  LPP++
Sbjct: 752 SYGRRMLKGLPPYR 765