Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., ATP-dependent helicase DinG/Rad3 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  347 bits (891), Expect = e-100
 Identities = 253/713 (35%), Positives = 377/713 (52%), Gaps = 54/713 (7%)

Query: 2   LTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIG 61
           LT  ++  I   Y+ LQ+Q+ +FIPR  Q  ++A++A+TL G   +  + L  EA TG+G
Sbjct: 3   LTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAG---EEGRHLAIEAPTGVG 59

Query: 62  KSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRY 121
           K+LSYL+  I +A   ++ +V+STA VALQ+Q+ +KDLPL R+I   +  F  A GR RY
Sbjct: 60  KTLSYLIPGIAIAREEQKTLVVSTANVALQDQIFSKDLPLLRKIIP-DLRFTAAFGRGRY 118

Query: 122 CCSERLAAACGIDDGQ---IALFESKPKPH---ETELLAELHTALSQGKWDGDRDGWPSP 175
            C   LAA    +  Q   +A  + +  P+   E +  A L   L   KWDG RD     
Sbjct: 119 VCPRNLAALASSEPTQQDLLAFLDDELTPNNQEEQKRCARLKGDLDGYKWDGLRDHTDIA 178

Query: 176 ISDELWSVIVSDKHSC-NGSFSVHRHCPFQKARSELDKADVIIANHSLVMADADLGGGVI 234
           I D+LW  + +DK SC N +   +R CPF  AR E+ +A+V++ANH+LVMA  +     +
Sbjct: 179 IDDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAAME--SEAV 236

Query: 235 LPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTA---------- 284
           LP P+  + V DE HHLP VAR+    +A +   ASW        SK  A          
Sbjct: 237 LPEPKHLLLVLDEGHHLPDVARDALEMSAEI--TASWYRLQLDLFSKLVATCMEQFRPKT 294

Query: 285 ---LGDEKRAERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADES 341
              L + +R     EE    +  LI +LN +   +M     E  +RF  GELP  + +  
Sbjct: 295 TPPLANPERLNAHCEE----VYELIASLNAILNLYMPAA-QEAEHRFAMGELPDEVMEIC 349

Query: 342 QALSKSSQKAMQSVSKVADLIAEKVKEGELAT--RIAEPALGELGFYVQRLENLTQVWQL 399
           Q L+K ++          + ++EK    ++    R+       LG +    E  +++W+L
Sbjct: 350 QRLAKLTETLRGLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMF----EAQSKLWRL 405

Query: 400 MAKPNKDKGAPLARWLEVSPEREGDYLV--SVSPLEIGWQLDQQLWSRCVGAILVSATLR 457
            A   +  GAP+++W      REG   V      + +  QL++ LW      I+ SATLR
Sbjct: 406 -ASMAQSSGAPVSKWA-TREIREGQLHVWFHCVGIRVSDQLERLLWRSVPHIIVTSATLR 463

Query: 458 ALNSFGFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKMEMEPQAEGYTAYLAKK 517
           +LNSF      +G+ +KA D  +F+AL SPF++  QG+L+IP+M  EP  +    ++A+ 
Sbjct: 464 SLNSFSRLQEMSGLKEKAGD--RFVALDSPFNHVEQGKLVIPQMRYEPTIDNEEQHIAEM 521

Query: 518 VLCY---LQADKAN--LVLFASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHK 572
              +   L++ K +  LVLFAS   M+   E +          L VQG++ R  ++  H+
Sbjct: 522 AAYFREQLESKKHHGMLVLFASGRAMQRFLEHV----ADVRLLLLVQGDQPRYRLVELHR 577

Query: 573 KLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNP 632
           K +E  + SVL G  SF+EGLDL GELL  + I KI F    SPV     E+++ L   P
Sbjct: 578 KRVESGERSVLVGLQSFAEGLDLKGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYP 637

Query: 633 FMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPPF 685
           F   ++P AS  LIQ VGRL+R     G VVI D+R+++K YG+ LL+ALP F
Sbjct: 638 FEVQSLPSASFNLIQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLNALPVF 690