Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., ATP-dependent DNA helicase from Erwinia tracheiphila SCR3

 Score =  204 bits (519), Expect = 1e-56
 Identities = 187/679 (27%), Positives = 299/679 (44%), Gaps = 76/679 (11%)

Query: 17  LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVV 76
           L   +  F PR  Q  +   + + +     ++ Q LV EAGTG GK+ +YL      A+ 
Sbjct: 11  LAQAINGFRPREPQGLMADAVRQAI-----ENKQELVVEAGTGTGKTYAYLAP----ALR 61

Query: 77  NKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDG 136
           + +KV++ST + ALQ+QL N+DLP             L KGR  Y C ERL     +  G
Sbjct: 62  SGKKVIVSTGSKALQDQLYNRDLPTVAAALKFKGRLALLKGRANYLCLERLEQQ-SMAGG 120

Query: 137 QIALFESKPKPHETELLAELHTALSQGKWDGDRDGWPSPISDEL-WSVIVSDKHSCNGS- 194
           ++         H     AE          DGD         D L W ++ S   +C GS 
Sbjct: 121 ELVAQAMSDLVHLRSWSAETQ--------DGDISTCGGVTEDSLLWPLVTSTNDNCLGSD 172

Query: 195 FSVHRHCPFQKARSELDKADVIIANHSLVMADADLG-GGVILPAPEETIYVFDEAHHLPT 253
              ++ C   KAR     ADV++ NH L +AD  +   G     P+  + +FDEAH +P 
Sbjct: 173 CPQYQDCFVVKARRRAMDADVVVVNHHLFLADMVVKESGFAELIPQADVMIFDEAHQVPD 232

Query: 254 VAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEARTAIQYLIPTLNQLP 313
           +A ++                  Q +S        K+    A++   A +  I  + QL 
Sbjct: 233 IASQY----------------FGQQISS-------KQLLDLAKDITIAYRTEIRDMQQLL 269

Query: 314 KQFMAEQFVEGI--YRFEHGELPQWLADESQALSKSS-QKAMQSVSKVADLIAEKVKEGE 370
           K   A++  +    +R   GE P +  +    L+  + Q+ +  +    +L  +  K   
Sbjct: 270 KS--ADRLAQSTQDFRLALGE-PGFRGNLRDLLNNPAIQRTLLLLDDALELCYDVAKMAL 326

Query: 371 LATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYLVSVS 430
             + + + A      Y  RL  L  V    A+P        + W E        ++++++
Sbjct: 327 GRSALLDAAFERAALYRSRLRRLKDV----AQPG------FSYWYECHVRH---FVLALA 373

Query: 431 PLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFDY 490
           PL +  +  + +  R    I  SATL        F  + G+   A      L L+SPFD+
Sbjct: 374 PLSVAERFREVMDERPASWIFTSATLSVNEQMTHFVERLGVRQAAT-----LILSSPFDF 428

Query: 491 PTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKANLVLFASYWQM-REVAESLKVEF 549
             Q  L +P+        G    +A+ +L  ++A+     L  +  QM R++AE  +   
Sbjct: 429 SRQALLYVPRNLPALNQAGGVQQMARMLLPLIEANNGRCFLLCTSRQMMRDLAEQFRALL 488

Query: 550 TKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKIP 609
           T     + +QGE S+ ++L    K       ++L  T SF EG+D+ G++L  +II K+P
Sbjct: 489 TL---PVLLQGETSKGQLL----KQFVAAGNALLVATSSFWEGVDVRGDVLSLVIIDKLP 541

Query: 610 FAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRRV 669
           FA P  P+ +A  E  +  GG+PF  + +P+A   L Q VGRL+R   D G +VI D R+
Sbjct: 542 FASPDDPLLKARMEDCKLRGGDPFDDVQLPDAVITLKQGVGRLIRDVDDRGVLVICDNRL 601

Query: 670 VSKRYGKALLDALPPFKRT 688
           V + YG   L++LPP  RT
Sbjct: 602 VMRPYGAVFLNSLPPAPRT 620