Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 725 a.a., Rad3-related DNA helicases from Enterobacter asburiae PDN3

 Score =  340 bits (871), Expect = 2e-97
 Identities = 245/708 (34%), Positives = 370/708 (52%), Gaps = 44/708 (6%)

Query: 2   LTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIG 61
           LT  ++  I   Y+ LQ Q+ +FIPR  Q  ++A++AKTL G      + L  EA TG+G
Sbjct: 3   LTAALKAQIGAWYKALQQQIPDFIPRAPQRQMIADVAKTLAG---DDGRHLAIEAPTGVG 59

Query: 62  KSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRY 121
           K+LSYL+  I +A    + +V+STA VALQ+Q+ +KDLPL R+I   +  F  A GR RY
Sbjct: 60  KTLSYLIPGIAIAREEDKTLVVSTANVALQDQIFSKDLPLLRKIIP-DLRFTAAFGRGRY 118

Query: 122 CCSERLAAACGIDDGQ---IALFESKPKPH---ETELLAELHTALSQGKWDGDRDGWPSP 175
            C   LAA    +  Q   +A  + +  P+   E E  A+L   L   KWDG RD     
Sbjct: 119 VCPRNLAALASSEPNQQDLLAFLDDELTPNNKAEQEQCAKLKAELDGYKWDGLRDHTSQA 178

Query: 176 ISDELWSVIVSDKHSC-NGSFSVHRHCPFQKARSELDKADVIIANHSLVMADADLGGGVI 234
           ISD+LW  + +DK SC N +   +R CPF  AR E+ +A+V++ANH+LVMA   L    +
Sbjct: 179 ISDDLWRRLSTDKASCLNRNCHYYRECPFFVARREIQEAEVVVANHALVMAA--LESEAV 236

Query: 235 LPAPEETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRA--- 291
           LP P+  + V DE HHLP VAR+    +A +   A W         K  A   E+     
Sbjct: 237 LPEPKNLLLVLDEGHHLPDVARDALEMSAEI--TAPWFRLQLDLFCKLVATCMEQFRPKT 294

Query: 292 -------ERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADESQAL 344
                  ER ++     +  LI +LN +   ++     E  +RF  GELP+ +    Q L
Sbjct: 295 TPPLAVPERLSDHCEE-VYGLIASLNNILNLYLPAT-QEAEHRFAMGELPEEVMAICQHL 352

Query: 345 SKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGELGFYVQRLENLTQVWQLMAKPN 404
           +K  +K         + ++EK    ++        L ++   +   E  +++W+L A   
Sbjct: 353 AKHLEKLRGLAEMFLNDLSEKTGSHDVVR--LHRVLLQMNRALGMFEAQSKLWRL-ASMA 409

Query: 405 KDKGAPLARWLEVSPEREGDY--LVSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSF 462
           +  GAP+ +W      R+G          + +  QL++ +W      ++ SATLR+LNSF
Sbjct: 410 QASGAPVTKWA-TRDVRDGQVHLFFHCVGIRVADQLEKLIWRSVPHVVVTSATLRSLNSF 468

Query: 463 GFFCRQAGISDKAEDGVQFLALASPFDYPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYL 522
                 +G+ +KA D  +F+AL SPF++  QG+L+IP+M+ EP  +    ++A+    + 
Sbjct: 469 SRLQEMSGLKEKAGD--RFVALDSPFNHCEQGKLVIPRMKFEPLIDNEEQHIAEMAAYFR 526

Query: 523 QADKAN-----LVLFASYWQMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEK 577
           +  ++      LVLFAS   M+   E +    T     L VQG++ R  ++  H+K I+ 
Sbjct: 527 EQVESKKYPGMLVLFASGRAMQRFLEHV----TDLRLLLLVQGDQPRYRLVETHRKRIDN 582

Query: 578 QKTSVLFGTGSFSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQIT 637
            + SVL G  SF+EGLDL G+ L  + I KI F    SPV     E+++ L   PF   +
Sbjct: 583 GERSVLVGLQSFAEGLDLKGDYLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQS 642

Query: 638 VPEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPPF 685
           +P AS  LIQ VGRL+R     G VVI D+R+++K YG+ LL+ALP F
Sbjct: 643 LPAASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGQRLLNALPIF 690