Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative ATP-dependent helicase, DinG family from Escherichia coli BL21

 Score =  211 bits (538), Expect = 7e-59
 Identities = 193/680 (28%), Positives = 314/680 (46%), Gaps = 78/680 (11%)

Query: 17  LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVV 76
           L   +  F PR  Q     +MA  +  A  K  Q LV EAGTG GK+ +YL   +     
Sbjct: 11  LAKAIPGFKPREPQR----QMAVAVTQAIEKG-QPLVVEAGTGTGKTYAYLAPALRA--- 62

Query: 77  NKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDG 136
            K+KV+IST + ALQ+QL ++DLP   +      +  L KGR  Y C ERL     +  G
Sbjct: 63  -KKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKGRSNYLCLERLEQQA-LAGG 120

Query: 137 QIALFESKPKPHETELLAE--LHTALSQGKWDGDRDGWPSPISD-ELWSVIVSDKHSCNG 193
            + +          ++L++  L  + S    DGD     S   D + W ++ S   +C G
Sbjct: 121 DLPV----------QILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPLVTSTNDNCLG 170

Query: 194 S-FSVHRHCPFQKARSELDKADVIIANHSLVMADA---DLGGGVILPAPEETIYVFDEAH 249
           S   +++ C   KAR +   ADV++ NH L +AD    + G G ++P  E  + +FDEAH
Sbjct: 171 SDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIP--EADVMIFDEAH 228

Query: 250 HLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEARTAIQYLIPTL 309
            LP +A ++   + + +      + +  +++  T L D ++ ++ A+            L
Sbjct: 229 QLPDIASQYFGQSLSSRQLLDLAKDI--TIAYRTELKDTQQLQKCADR-----------L 275

Query: 310 NQLPKQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKVKEG 369
            Q  + F   Q  E  YR   G L + LA+         Q+A   +    +L  +  K  
Sbjct: 276 AQSAQDFRL-QLGEPGYR---GNLRELLANPQ------IQRAFLLLDDTLELCYDVAKLS 325

Query: 370 ELATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYLVSV 429
              + + + A      Y  RL+ L ++ Q             + W E +      + +++
Sbjct: 326 LGRSALLDAAFERATLYRTRLKRLKEINQ----------PGYSYWYECTSRH---FTLAL 372

Query: 430 SPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPFD 489
           +PL +  +  + +  +    I  SATL   +    F  + GI ++AE     L L SPFD
Sbjct: 373 TPLSVADKFKELMAQKPGSWIFTSATLSVNDDLHHFTSRLGI-EQAES----LLLPSPFD 427

Query: 490 YPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKAN-LVLFASYWQMREVAESLKVE 548
           Y  Q  L +P+   +    G    LA  +   ++A+     +L  S+  MR++AE  +  
Sbjct: 428 YSRQALLCVPRNLPQTNQPGSARQLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRAT 487

Query: 549 FTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLENLIITKI 608
            T     + +QGE S+ ++L +          ++L  T SF EG+D+ G+ L  +II K+
Sbjct: 488 MTL---PVLLQGETSKGQLLQQ----FVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKL 540

Query: 609 PFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGRVVILDRR 668
           PF  P  P+ +A  E  +  GG+PF ++ +P+A   L Q VGRL+R   D G +VI D R
Sbjct: 541 PFTSPDDPLLKARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR 600

Query: 669 VVSKRYGKALLDALPPFKRT 688
           +V + YG   L +LPP  RT
Sbjct: 601 LVMRPYGATFLASLPPAPRT 620