Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 921 a.a., 3'-5' exonuclease DinG from Azospirillum sp. SherDot2

 Score = 94.4 bits (233), Expect = 2e-23
 Identities = 157/679 (23%), Positives = 263/679 (38%), Gaps = 83/679 (12%)

Query: 51  MLVAEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATVALQEQLLNKDLPLYRRISDQNF 110
           +++AEAGTG+GK+L YL      A  N   V IST T  LQ Q+  +   LY   + +  
Sbjct: 245 VVLAEAGTGVGKTLGYLAPATVWAEKNGGTVWISTYTRNLQHQIDAELDRLYADPATKAR 304

Query: 111 SFILAKGRQRYCCSERLAAACGIDDGQIALFESKP-KPHE---TELLAELHTALSQGKW- 165
             +L KGR+ Y C   L  A            + P +PH      L+A    A   G   
Sbjct: 305 KVVLRKGRENYLCLLNLEEA----------VRAMPFQPHNAIGVGLMARWAAATRDGDMT 354

Query: 166 DGDRDGWPSPISDELWSVIVSDKH-SCNGSFSVH-RHCPFQKARSELDKADVIIANHSLV 223
            GD  GW   I+    ++ ++D+   C  S   H   C  +K+     +AD++IANH+LV
Sbjct: 355 GGDFPGWLVDIAGRGPTMGLADRRGECIYSACDHYARCYIEKSVRRARRADIVIANHALV 414

Query: 224 MADADLGGGVILPAPEETIYVFDEAHHLPTVAREHASAAATLKGAAS---WLEKLNQSLS 280
           M  A LGGG     P    YVFDE HH+   A    +   T +       WL    ++  
Sbjct: 415 MVQAALGGGEEPTLPSR--YVFDEGHHVFDAADSAFAGHLTCRETQELRRWLLGAEET-G 471

Query: 281 KFTALGDEKRAERFA---EEARTAIQYLIPTLNQLPKQFMAEQF--------VEGIYRFE 329
           +  A G ++R E      EEA   +  ++     LP    + +          E      
Sbjct: 472 RSRARGLKRRLEDIVAGDEEALRHLDDILIGARVLPADGWSARLAADNPQGPTERFLLLA 531

Query: 330 HGELPQWLADESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGELGFYVQR 389
             ++    A +    S  + KA      V  L+    +  +   R++EP         QR
Sbjct: 532 RQQVYARTAGQGGPYSLEADKAY----PVDGLLEAAAELEQSLVRLSEPVEALARRLAQR 587

Query: 390 LENLT---------QVWQLMAKPNKDKGAPLARW---LEVSPEREGDYLVSVSPLE--IG 435
           LE+ +         ++  L    ++     +  W   L   P     + V    +E   G
Sbjct: 588 LEDESAELDSDQRRRIDALSRSLHRRGTLTVEGWRAMLRTLPTETPSHFVDWFAVERIDG 647

Query: 436 WQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISD----------KAEDGVQFLALA 485
             +D  L+   V   +  A   A  + G     A ++D           AED      L 
Sbjct: 648 RDVDVGLYRHWVDPTVPFAEALAGPAHGLVVTSATLTDGTGDIGQDWRAAEDRCGASHLP 707

Query: 486 SP---------FDYPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKANLVLFASYW 536
           +P         FDYP +  + +   ++     G  +   K +  ++ A    L LF +  
Sbjct: 708 APAIRAQVPSPFDYPNRTRVFVVN-DVRKDDLGQVSAAYKSL--FMAAGGGGLGLFTAIS 764

Query: 537 QMREVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLP 596
           ++R V + +     +    L  Q        ++    +   ++ + L GT +  +G+D+P
Sbjct: 765 RLRAVRDRIAEPLDQVNIPLYAQHVDPLD--VSTLIDIFRNEEHACLLGTDAVRDGVDVP 822

Query: 597 GELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKE 656
           G  L  ++  ++P+  P    +  H    +  G   +  +       +L Q+ GRL+R+ 
Sbjct: 823 GRSLRLIVFDRVPWPRP----DILHRARREAFGRRRYEDMI---TRLRLKQAFGRLVRRA 875

Query: 657 RDSGRVVILDRRVVSKRYG 675
            D+G  V+LD  + S+  G
Sbjct: 876 DDTGVFVLLDPMMPSRLGG 894