Pairwise Alignments

Query, 691 a.a., ATP-dependent DNA helicase DinG from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., putative ATP-dependent helicase DinG from Alteromonas macleodii MIT1002

 Score =  218 bits (556), Expect = 5e-61
 Identities = 196/687 (28%), Positives = 313/687 (45%), Gaps = 92/687 (13%)

Query: 17  LQNQLENFIPRRAQNFLVAEMAKTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVV 76
           L   ++ F+PR AQ     EMAK +  A   +T  L+ EAGTG GK+ +YL      A++
Sbjct: 14  LAGAIKGFVPREAQT----EMAKAVKRAID-TTGSLIVEAGTGTGKTFAYLAP----ALL 64

Query: 77  NKRKVVISTATVALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDD- 135
           +  K ++ST T  LQEQL ++DLPL ++         L KGR  Y C  R+A   G    
Sbjct: 65  SDGKAIVSTGTKNLQEQLFHRDLPLVKKALGSKRKTALLKGRSNYLCLHRVAQHSGNSTL 124

Query: 136 ------GQIALFESKPKPHETELLAELHTALSQGKWDGDRDGWPSPISDELWSVIVSDKH 189
                 GQ++  +      +T  + EL T                P    +  ++ S   
Sbjct: 125 VEKEVLGQLSEVKRWSSTTKTGDMGELKTL---------------PEDARVLPLVTSTVD 169

Query: 190 SCNG-SFSVHRHCPFQKARSELDKADVIIANHSLVMADA---DLGGGVILPAPEETIYVF 245
           +C G     +  C   KAR +   AD+I+ NH L  AD    D G G ++P  E    +F
Sbjct: 170 NCLGRDCPDYEDCYLVKARRKALDADIIVVNHHLFFADMALKDTGFGELIP--EADAIIF 227

Query: 246 DEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDEKRAERFAEEAR---TAI 302
           DEAH +P +A ++   + + +      + +  +L   T L D  + ++ A++ R   + +
Sbjct: 228 DEAHQIPDIASDYFGESLSTRQIHDIAKDI--TLLFRTVLKDAGQLDKAADKCRMIASDL 285

Query: 303 QYLIPTLNQLPKQFMAEQFVEGIYRFEHGELPQWLADESQALSKSSQKAMQSVSKVADLI 362
           + L P   +  +   AE       R + G+L       ++AL    +     + +  DL 
Sbjct: 286 RLLFPDTAE--RGNWAEALDRDDVRMQVGKL-------AEALGVLHEVCKLHIGRDKDL- 335

Query: 363 AEKVKEGELATRIAEPALGELGFYVQRLENLTQVWQLMAKPNKDKGAPLARWLEVSPERE 422
            + + E  +A R    AL +                     NK +   L  W E +    
Sbjct: 336 -DNMYERVVAAREQLDALSD---------------------NKQENVSL--WYETTQRH- 370

Query: 423 GDYLVSVSPLEIGWQLDQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFL 482
              ++ ++PL I  +  + + S   G I  SATL     F  F R+ G+ D      + L
Sbjct: 371 --LIMHLTPLSIAAKFRRFVSSPPRGWIFTSATLMVNGGFDHFQRRMGLED-----AETL 423

Query: 483 ALASPFDYPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKAN-LVLFASYWQMREV 541
            L SPF+YP Q  L +P+   EP +      L +     ++A +    +LF S+  +RE+
Sbjct: 424 GLDSPFNYPEQAMLCVPRYLPEPNSYAMRETLLETAKRLIKASRGRCFLLFTSHAMLREI 483

Query: 542 AESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGSFSEGLDLPGELLE 601
           A+ L+ E       L VQG  ++  +L+ +       + +VL GTG+F EG+D+ G  L 
Sbjct: 484 AQKLEDEIDN---PLLVQGTTTKQALLDAYLA----DEKAVLMGTGAFWEGVDVRGNDLV 536

Query: 602 NLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITVPEASKKLIQSVGRLLRKERDSGR 661
            ++I K+PFA P  P+ QA  E +++ G NPF  I +P+A   L Q  GRL+R   D G 
Sbjct: 537 CVMIDKLPFASPDDPLLQARMEDVKKRGANPFGVIQIPQAVITLKQGAGRLIRDPSDKGV 596

Query: 662 VVILDRRVVSKRYGKALLDALPPFKRT 688
           +VI D R+V+K + K  + +LP  KRT
Sbjct: 597 LVICDNRLVTKPFAKTFVGSLPDMKRT 623