Pairwise Alignments

Query, 368 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., Outer membrane porin protein NmpC precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 10/123 (8%)

Query: 25  MKKTLLALAV--LAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAG 82
           MK  L+A+AV  L AAG VNAAE+   D   +D YG++  +  F +D         +R G
Sbjct: 1   MKLKLVAVAVTSLLAAGVVNAAEVYNKDGNKLDLYGKVHAQHYFSDDNGSDGDKTYARLG 60

Query: 83  VDANYTVNDSLALQGKVEFALK-------DSGDMYVRNHILGVK-TNFGKFSFGKQWTTS 134
                 +ND L   G+ E+  K        +     R    G+K  ++G F +G+ +  +
Sbjct: 61  FKGETQINDQLTGFGQWEYEFKGNRTESQGADKDKTRLAFAGLKFADYGSFDYGRNYGVA 120

Query: 135 DDV 137
            D+
Sbjct: 121 YDI 123