Pairwise Alignments

Query, 368 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., outer membrane porin protein C (NCBI) from Escherichia coli BW25113

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 44/167 (26%), Positives = 68/167 (40%), Gaps = 27/167 (16%)

Query: 25  MKKTLLALAV--LAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAG 82
           MK  +L+L V  L  AG+ NAAE+   D   +D YG++     F ++KD        R G
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYFSDNKDVDGDQTYMRLG 60

Query: 83  VDANYTVNDSLALQGKVEFAL-----KDSGDMYVRNHILGVK-TNFGKFSFGKQWTTSDD 136
                 V D L   G+ E+ +     ++  + + R    G+K  + G F +G+ +    D
Sbjct: 61  FKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDVGSFDYGRNYGVVYD 120

Query: 137 VYG-ADYSYFFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGYGF 182
           V    D    FGG                    Y +D+F  + G GF
Sbjct: 121 VTSWTDVLPEFGGD------------------TYGSDNFMQQRGNGF 149