Pairwise Alignments

Query, 368 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 368 a.a., Outer membrane protein (porin) from Enterobacter asburiae PDN3

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 11/124 (8%)

Query: 25  MKKTLLALAV--LAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRA- 81
           MK+ +LA+ +  L  AG+ NAAEI   +   +DFYG++  E  F+   D T  + ++ A 
Sbjct: 2   MKRNILAVVIPALLVAGAANAAEIYNKNGNKLDFYGKVNAEHDFVTSGDNTNNNDATYAQ 61

Query: 82  -GVDANYTVNDSLALQGKVEFAL----KDSGDMYVRNHI--LGVKT-NFGKFSFGKQWTT 133
            G      +ND L   G+ E+       ++G    +N +   G+K  + G   +G+ +  
Sbjct: 62  IGFKGETQINDQLTGYGQWEYRFLANQAENGAQTNKNRLAFAGLKAGDAGSIDYGRNYGI 121

Query: 134 SDDV 137
             DV
Sbjct: 122 VYDV 125