Pairwise Alignments

Query, 368 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., Outer membrane protein (porin) from Enterobacter asburiae PDN3

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 10/123 (8%)

Query: 25  MKKTLLALAV--LAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAG 82
           MK  L+A+AV  + AAG VNAAEI   D   +D YG++     F +D D        R G
Sbjct: 1   MKLKLVAVAVTSMLAAGVVNAAEIYNKDGNKLDLYGKVTGLHYFSDDTDNDGDKTYVRLG 60

Query: 83  VDANYTVNDSLALQGKVEFALK-------DSGDMYVRNHILGVKTN-FGKFSFGKQWTTS 134
                 +ND L+  G+ E+  K        S     R    G+K N FG F +G+ +  +
Sbjct: 61  FKGETQINDQLSGYGQWEYEFKGNRSESQGSDGSKTRLAFAGLKFNEFGSFDYGRNYGVA 120

Query: 135 DDV 137
            D+
Sbjct: 121 YDI 123