Pairwise Alignments

Query, 368 a.a., porin from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., Outer membrane protein (porin) from Enterobacter asburiae PDN3

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 22/139 (15%)

Query: 25  MKKTLLALAV--LAAAGSVNAAEILKSDAGTVDFYGQLRTELKFLEDKDPTIGSGSSRAG 82
           MK  +L+L V  L  AG+ NAAEI   D   +D YG++     F +DK         R G
Sbjct: 1   MKVKVLSLLVPALLVAGAANAAEIYNKDGNKLDLYGKVDGLHYFSDDKSADGDQTYMRLG 60

Query: 83  VDANYTVNDSLALQGKVEFAL-----KDSGDMYVRNHILGVK-TNFGKFSFGK------- 129
                 VND L   G+ E+ +     +   D + R    G+K  + G F +G+       
Sbjct: 61  FKGETQVNDQLTGYGQWEYQIQGNTSESENDAWTRVAFAGLKFADAGSFDYGRNYGVIYD 120

Query: 130 --QWTT-----SDDVYGAD 141
              WT        D YGAD
Sbjct: 121 VTSWTDVLPEFGGDTYGAD 139