Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Variovorax sp. SCN45

 Score =  474 bits (1219), Expect = e-138
 Identities = 243/462 (52%), Positives = 320/462 (69%), Gaps = 17/462 (3%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L+IYN+L+R+ EEF P+  G+V MYVCG+T+YD CHIGH R  ++FDVV R+LR   Y +
Sbjct: 3   LRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDFCHIGHARMMMAFDVVQRWLRASDYAV 62

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
            +VRNITDIDDKII R+ +   T   LT+ +I  M+ D  AL I+ P +EPRAT Y+ ++
Sbjct: 63  AYVRNITDIDDKIIARSVQRGITIRELTDEVIAAMHEDIGALGIEPPTIEPRATEYVPQM 122

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           + ++E+L  +G AY +DNGDV + V ++  YGKLS + LD+L AG RV +   K+ PLDF
Sbjct: 123 LGIIEKLEHKGLAYRSDNGDVNYAVRKFPGYGKLSGKSLDELHAGERVAVLDGKQDPLDF 182

Query: 182 VLWKMSKPGEPT---WESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENE 238
           VLWK +KP EP    WES +G+GRPGWHIECSAM+ + LG  FDIHGGG+DLQFPHHENE
Sbjct: 183 VLWKAAKPTEPADAKWESAYGTGRPGWHIECSAMSCATLGETFDIHGGGADLQFPHHENE 242

Query: 239 IAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHY 298
           IAQS  A+       W+H+G V VD EKMSKSLGNFFTIR+VL  YDAE++R+FL+  HY
Sbjct: 243 IAQSEGANGKPLSRFWVHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAESLRFFLVRTHY 302

Query: 299 RSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGG----EEYVTRFTAAMNDDFNTPE 354
           RS LNYS+ +L+ AR SL+RLY A   LD   PA       + Y  RF AAM++DF TPE
Sbjct: 303 RSALNYSDAHLDDARNSLKRLYTA---LDLVAPADVSIDWTQPYAARFKAAMDEDFGTPE 359

Query: 355 AYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQI 414
           A +VLF++A E+NR KS +         L++ LA  +G+L  +P +F Q  +  +DAA I
Sbjct: 360 AIAVLFELAGEVNRTKSAE------TAGLLKALAGSLGLLQGDPRSFLQAGSTLDDAA-I 412

Query: 415 EALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTW 456
           +A I  R  ++A K++A AD  R +L E GIVL+D P GTTW
Sbjct: 413 QARIAERAAAKAAKNFAEADRIRQELLEQGIVLKDSPTGTTW 454