Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Sphingobium sp. HT1-2

 Score =  219 bits (558), Expect = 2e-61
 Identities = 159/494 (32%), Positives = 234/494 (47%), Gaps = 46/494 (9%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L+++NSLTR  E F PI      +Y CG T+Y+  HIG+ R +V  D + R L + G D+
Sbjct: 15  LRLFNSLTRSFEPFSPIEPNHARVYSCGPTVYNYAHIGNLRAYVFVDTLRRTLLWKGLDV 74

Query: 62  TFVRNITDI----------DDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVE 111
           T + NITD+          DDK+   A  +A++   +     +   A+   LNI  P   
Sbjct: 75  TQIINITDVGHLTSDADAGDDKMEAAARASAKSIWDIAAHYTEAFKANIADLNIMAPSEW 134

Query: 112 PRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDI 171
             AT Y+ ++I   +++ +    Y  ++G + F+ S    YG L+    D   A AR+D 
Sbjct: 135 TVATDYVPQMIEFAQKIAD-AHCYELESG-LYFDSSTVPNYGALAGGRDDA--AYARIDP 190

Query: 172 EAAKRSPLDFVLWKMSKPGEPT---WESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGS 228
            A KR+P DF +W+ S PGE     W+SPWG G PGWH+ECS M+ + LG  FDIH GG 
Sbjct: 191 VAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSQARLGQPFDIHTGGI 250

Query: 229 DLQFPHHENEIAQS---CCAHDTQYVNT----WMHSGMVMVDKEKMSKSLGNFFTIRDVL 281
           D +  HH NEIAQ+   C   D Q   T    WMH+  ++  + KMSKS G F T+  ++
Sbjct: 251 DHREIHHPNEIAQNQAYCGCTDAQPDFTGARWWMHNNFLVDRQGKMSKSKGGFTTLFSLV 310

Query: 282 -GHYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEE--- 337
                    R   +  HYRS+L +S +NL  A   L+RL   + GL         +    
Sbjct: 311 DAGVHPIAYRLLCLGAHYRSELEFSADNLAAALTRLKRLVMGVEGLKGRAEGITWQSVTL 370

Query: 338 -------------YVTRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLM 384
                         + +F AA+ DD  TP A  +L     E   +K   +     L +  
Sbjct: 371 DYLRANLHPKLVPLLEQFDAAIADDLMTPRALPLL----EEAIAMKKVPVDEKLCLIAAF 426

Query: 385 RELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMG 444
            +   +  +     E   +         +IEA ++ R  +RA KD+A +D  RD L   G
Sbjct: 427 DQALGLRLLDLTRAELRVRPKDAQITPEEIEAELERRTAARAEKDFALSDEIRDALIARG 486

Query: 445 IVLEDG-PNGTTWR 457
           + + DG P    WR
Sbjct: 487 VEVMDGDPLRWDWR 500