Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  478 bits (1230), Expect = e-139
 Identities = 244/464 (52%), Positives = 317/464 (68%), Gaps = 13/464 (2%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           LKIYN+L+R+ E+F+PI  G V MYVCG+TIYDLCHIGH R  ++FDVV R+L+  G  +
Sbjct: 3   LKIYNTLSRRLEDFQPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKVSGLRV 62

Query: 62  TFVRNITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIEEI 121
           T+VRNITDIDDKIIKRA E   T  +LT+ +   M+ D  AL I+ P +EPRAT Y+ ++
Sbjct: 63  TYVRNITDIDDKIIKRALERGITLRALTDEMTAAMHQDIGALGIEPPSLEPRATEYVPQM 122

Query: 122 IALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDF 181
           ++L+E L  +G AY ADNGDV + V ++  YGKLS + LD L+AG RV + + K  PLDF
Sbjct: 123 LSLIETLRGKGLAYQADNGDVNYAVRKFPGYGKLSGKSLDDLRAGERVAVASDKNDPLDF 182

Query: 182 VLWKMSKPGEPT---WESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFPHHENE 238
           VLWK +KP EP    W+S +G+GRPGWHIECSAM+ S LG  FDIHGGG+DLQFPHHENE
Sbjct: 183 VLWKSAKPEEPAEAKWDSAYGAGRPGWHIECSAMSCSTLGETFDIHGGGADLQFPHHENE 242

Query: 239 IAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLGHYDAETVRYFLMSGHY 298
           IAQS  A        W+H+G V VD EKMSKSLGNFFTIR+VL  YD ETVR+F++  HY
Sbjct: 243 IAQSEGATGKPLARFWVHNGFVRVDNEKMSKSLGNFFTIREVLAKYDPETVRFFILRAHY 302

Query: 299 RSQLNYSEENLNQARASLERLYNALRGLDRSVPAA--GGEEYVTRFTAAMNDDFNTPEAY 356
           RS LNYS+ +L+ AR +L+RLY AL  +  +  A     + +  RF AAM++DF TPEA 
Sbjct: 303 RSALNYSDAHLDDARGALKRLYTALSHVPPAAQAQIDWNQPHAERFRAAMDEDFGTPEAV 362

Query: 357 SVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDE--DAAQI 414
           +VLF++A E+NR K       + L  L+R L   +G+L  +P ++ QG   +   D   I
Sbjct: 363 AVLFELAGEVNRSKD------AGLAGLLRALGGTLGLLQADPASYLQGGGAEGGLDETAI 416

Query: 415 EALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPNGTTWRR 458
             LI  R  ++ +KD+  AD  R +L E GIVL+D P GTTW R
Sbjct: 417 LDLIDQRTTAKQSKDFTGADRIRQQLLEQGIVLKDSPAGTTWER 460