Pairwise Alignments

Query, 459 a.a., cysteine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., cysteine--tRNA ligase from Bacteroides ovatus ATCC 8483

 Score =  335 bits (858), Expect = 3e-96
 Identities = 192/494 (38%), Positives = 288/494 (58%), Gaps = 46/494 (9%)

Query: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYDL 61
           L IYN+L R+KE F P+ A  VGMYVCG T+Y   H+GH R  ++FDV+ RYL +LGY +
Sbjct: 5   LTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHLGYKV 64

Query: 62  TFVRNITDI----------DDKIIKRAA-ENAETCESLTERLIQEMYADFDALNIKRPDV 110
            +VRNITD+          +DKI K+A  E  E  E + +  +   +   +ALN+  P +
Sbjct: 65  RYVRNITDVGHLEHDADDGEDKIAKKARLEELEPME-VVQYFLNRYHKAMEALNVLSPSI 123

Query: 111 EPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSE---YGKLSKQDLDQLQAGA 167
           EP A+ +I E I LV+++++ G+AY ++ G V F+V++Y++   YGKLS ++LD +    
Sbjct: 124 EPHASGHIIEQIQLVQKILDAGYAYESE-GSVYFDVAKYNKDYHYGKLSGRNLDDVLNTT 182

Query: 168 R-VDIEAAKRSPLDFVLWKMSKPGE-PTWESPWGSGRPGWHIECSAMNSSILGTHFDIHG 225
           R +D ++ KR+P DF LWK ++P     W SPW  G PGWH EC+AM    LG HFDIHG
Sbjct: 183 RDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHFDIHG 242

Query: 226 GGSDLQFPHHENEIAQSCCAHDTQYVNTWMHSGMVMVDKEKMSKSLGNFFTIRD------ 279
           GG DL FPHHE EIAQS  +     V+ WMH+ M+ ++  KM KSLGNF T+ +      
Sbjct: 243 GGMDLIFPHHECEIAQSVASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEFFTGTH 302

Query: 280 --VLGHYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEE 337
             +   Y   T+R+F++  HYRS +++S E L  +   L+RL  A+  LD+  P++   E
Sbjct: 303 KLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPSSTTSE 362

Query: 338 YV------TRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDMT-NASALGSLMREL--- 387
            +       +   AMNDD NTP   + LF+ AR IN + + + T +A  L  L       
Sbjct: 363 GINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKETFHLF 422

Query: 388 -ADVIGILYQEPEAFFQGSAEDEDAAQ---IEALIKLRNDSRATKDWANADLARDKLNEM 443
             D++G+  +      +GS++  +AA    ++ L++ R  ++A KDWA +D  R+ L  +
Sbjct: 423 SFDIMGLKEE------KGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTAL 476

Query: 444 GIVLEDGPNGTTWR 457
           G  ++D  +G  WR
Sbjct: 477 GFEIKDTKDGFEWR 490